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L1_007_365G1_scaffold_722_6

Organism: dasL1_007_365G1_concoct_9_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 6778..7893

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=B0NBC7_CLOSV similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 371.0
  • Bit_score: 717
  • Evalue 5.80e-204
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 371.0
  • Bit_score: 717
  • Evalue 8.10e-204
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 373.0
  • Bit_score: 647
  • Evalue 2.10e-183

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Taxonomy

[Clostridium] scindens → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1116
ATGGAAGAAAACACAGTGAAATTCGAGGAGAAATTAAAAGAACTGGTATCTCTTGGAAAAAAGAAGAAAAGTATTCTGGAATTACAGGAAATCAATGATTTCTTCTCGGATATGGAACTTGAGGCCGAGCAGATGGAGAGAGTGTTCGAACATCTGGAGTCCAATAACATTGATGTCCTGCGGATCAGCGGCGACGAGGATGATGATATCGACGATGTGGATATCGTCATTGCGGAAGAAGACGATGTGGACATGGAAAAGATCGACTTGAGCGTGCCGGATGGCATCAGCATTGAGGATCCAGTCCGCATGTACCTGAAAGAGATTGGAAAGGTTCCGCTTCTGACCGCAGAAGAAGAAGTGGATCTTGCGAAACGGATGGCTGACGGCGATGAAGAGGCCAAGAAGCGTCTGGCAGAGGCCAATCTGCGTCTGGTTGTCAGCATTGCGAAGCGTTATGTTGGGCGCGGCATGCTGTTTCTGGACCTGATTCAGGAAGGCAATCTGGGCCTGATCAAGGCGGTTGAAAAGTTTGACTATCATAAGGGATTTAAGTTCAGCACATATGCCACATGGTGGATCCGCCAGGCCATCACAAGAGCGATTGCAGACCAGGCAAGGACGATTCGGATTCCGGTCCATATGGTGGAGACGATCAACAAGCTGATCCGCGTGTCCAGACAATTATTGCAGGAACTAGGACGCGAGCCTACGCCGGAAGAGATTGCGGCGCAGCTGGACATGCCGGTTGAGAGGGTCCGGGAGATTCTGAAGATTTCCCAGGAGCCGGTATCTTTGGAGACGCCTATCGGCGAGGAAGAAGACAGTCATCTGGGAGACTTCATACAGGACGACAATGTGCCAGTGCCAGCGGAAGCGGCTGCACAGACACTGTTAAAGGAGCAGCTGGATGAGGTTCTGGACACATTGACGGAAAGAGAGCAGAAGGTATTGCGGCTGCGGTTCGGAATGAATGACGGGCGCGCCCGTACCCTGGAAGAGGTTGGAAAGGAATTCGACGTAACCCGCGAGCGTATCCGCCAGATTGAGGCGAAGGCGCTGCGCAAGCTCAGACACCCCAGCCGTAGTAGAAAATTGAGAGATTATCTGGATTAA
PROTEIN sequence
Length: 372
MEENTVKFEEKLKELVSLGKKKKSILELQEINDFFSDMELEAEQMERVFEHLESNNIDVLRISGDEDDDIDDVDIVIAEEDDVDMEKIDLSVPDGISIEDPVRMYLKEIGKVPLLTAEEEVDLAKRMADGDEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYHKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPTPEEIAAQLDMPVERVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPAEAAAQTLLKEQLDEVLDTLTEREQKVLRLRFGMNDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRHPSRSRKLRDYLD*