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L1_007_365G1_scaffold_722

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_722_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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632..1222
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBD3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08441.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_722_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1332..2858
-----------------
DNA (1527bp)
protein (509aa)
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:EDS08440.1}; EC=2.7.4.- {ECO:0000313|EMBL:EDS08440.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Polyphosphate:AMP phosphotransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBD2_CLOSV
hypothetical protein
L1_007_365G1_scaffold_722_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2862..3884
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C393_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73269.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Protein of unknown function (DUF2804).
L1_007_365G1_scaffold_722_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3908..4915
-----------------
DNA (1008bp)
protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSU6_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_722_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4963..6738
-----------------
DNA (1776bp)
protein (592aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSU5_9FIRM
L1_007_365G1_scaffold_722_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6778..7893
-----------------
DNA (1116bp)
protein (372aa)
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=B0NBC7_CLOSV
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
RNA polymerase, sigma 70 subunit, RpoD
L1_007_365G1_scaffold_722_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7907..8605
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NBC6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38396.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted SAM-dependent methyltransferase
L1_007_365G1_scaffold_722_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8631..9422
-----------------
DNA (792bp)
protein (264aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Clostridiales RepID=B0NBC5_CLOSV
conserved hypothetical protein TIGR00486
L1_007_365G1_scaffold_722_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9458..11125
-----------------
DNA (1668bp)
protein (556aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=2 Tax=Clostridiales RepID=B0NBC4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38394.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_722_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11172..13058)
-----------------
DNA (1887bp)
protein (629aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38393.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Spermidine/putrescine-binding periplasmic protein
L1_007_365G1_scaffold_722_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13055..13885)
-----------------
DNA (831bp)
protein (277aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KST9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38392.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_722_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13875..14948)
-----------------
DNA (1074bp)
protein (358aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Polyamine ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NBC1_CLOSV
L1_007_365G1_scaffold_722_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14980..15519)
-----------------
DNA (540bp)
protein (180aa)
Cupin domain protein n=2 Tax=Clostridiales RepID=B0NBC0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38390.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
XRE family transcriptional regulator
L1_007_365G1_scaffold_722_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15684..16784)
-----------------
DNA (1101bp)
protein (367aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Clostridiales RepID=F7KST6_9FIRM
L1_007_365G1_scaffold_722_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16959..18674
-----------------
DNA (1716bp)
protein (572aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBB8_CLOSV
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDS08426.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_722_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18709..19842
-----------------
DNA (1134bp)
protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Clostridiales RepID=B0NBB7_CLOSV
L1_007_365G1_scaffold_722_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19940..20245
-----------------
DNA (306bp)
protein (102aa)
Preprotein translocase, YajC subunit n=2 Tax=Clostridiales RepID=B0NBB6_CLOSV
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDS08424.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
preprotein translocase, YajC subunit
L1_007_365G1_scaffold_722_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20389..21168
-----------------
DNA (780bp)
protein (260aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBB5_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS08423.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_365G1_scaffold_722_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21158..23203
-----------------
DNA (2046bp)
protein (682aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KST1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38384.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_722_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23200..23883
-----------------
DNA (684bp)
protein (228aa)
Response regulator receiver domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBB3_CLOSV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS08421.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
two component transcriptional regulator, winged helix family
L1_007_365G1_scaffold_722_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23870..24796
-----------------
DNA (927bp)
protein (309aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBB2_CLOSV
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDS08420.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
integral membrane sensor signal transduction histidine kinase
L1_007_365G1_scaffold_722_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24833..26212
-----------------
DNA (1380bp)
protein (460aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38381.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
extracellular solute-binding protein
L1_007_365G1_scaffold_722_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26227..27069
-----------------
DNA (843bp)
protein (281aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NBB0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38380.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_722_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27069..27938
-----------------
DNA (870bp)
protein (290aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38379.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_722_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27997..30261
-----------------
DNA (2265bp)
protein (755aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBA8_CLOSV
L1_007_365G1_scaffold_722_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30332..30853)
-----------------
DNA (522bp)
protein (174aa)
Nitroreductase family protein n=2 Tax=Clostridiales RepID=B0NBA7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38377.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Nitroreductase
L1_007_365G1_scaffold_722_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30982..31305
-----------------
DNA (324bp)
protein (108aa)
Transcriptional regulator, HxlR family n=2 Tax=Clostridiales RepID=B0NBA5_CLOSV
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EDS08413.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_722_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31453..33705
-----------------
DNA (2253bp)
protein (751aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUE7_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:EGN36127.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_722_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33720..34445
-----------------
DNA (726bp)
protein (242aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Clostridiales RepID=B0NBA3_CLOSV
pyruvate formate-lyase activating enzyme
L1_007_365G1_scaffold_722_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34542..35687)
-----------------
DNA (1146bp)
protein (382aa)
LysM domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBA2_CLOSV
LysM domain protein {ECO:0000313|EMBL:EDS08409.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
glycoside hydrolase
Displaying items 1-30 of 32 in total

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