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L1_007_365G1_scaffold_4714

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_4714_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(104..862)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZM6_9FIRM
L1_007_365G1_scaffold_4714_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(865..1482)
DNA (618bp) protein (206aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV48_9FIRM
L1_007_365G1_scaffold_4714_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1792..3309)
DNA (1518bp) protein (506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHF9_9FIRM
Signal transduction histidine kinase
L1_007_365G1_scaffold_4714_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3309..3986)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33582.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_4714_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4262..4495
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33584.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_4714_6
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4637..4855)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DF36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD88017.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_365G1_scaffold_4714_7
unknown

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comp(5036..5242)
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_365G1_scaffold_4714_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5401..5709
DNA (309bp) protein (103aa)
Transcriptional regulator n=2 Tax=unclassified Lachnospiraceae RepID=E5XD16_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EFV20774.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
helix-turn-helix family protein
L1_007_365G1_scaffold_4714_9
unknown

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5944..6231
DNA (288bp) protein (96aa)

This feature has no annotations

L1_007_365G1_scaffold_4714_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6236..6472
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35121.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
integrase family protein
L1_007_365G1_scaffold_4714_11
unknown

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6791..7042
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 11 items

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