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L1_007_365G1_scaffold_1032

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1032_1
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..3700
DNA (3699bp) protein (1233aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EDF9EC
hypothetical protein
Surface-anchored protein {ECO:0000313|EMBL:KJU93727.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
L1_007_365G1_scaffold_1032_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3974..6898
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32009.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted Zn-dependent peptidases, insulinase-like
L1_007_365G1_scaffold_1032_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6930..7838
DNA (909bp) protein (303aa)
GTPase Era n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQN8_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
GTP-binding protein Era
L1_007_365G1_scaffold_1032_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7841..8608
DNA (768bp) protein (256aa)
DNA repair protein RecO n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5J5_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DNA replication and repair protein RecO
L1_007_365G1_scaffold_1032_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8818..10212
DNA (1395bp) protein (465aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHR6_9FIRM
L1_007_365G1_scaffold_1032_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10393..11436
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33998.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted acyltransferases
L1_007_365G1_scaffold_1032_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11736..12614)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33997.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Galactose mutarotase and related enzymes
L1_007_365G1_scaffold_1032_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12917..14173
DNA (1257bp) protein (419aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JA86_9FIRM
L1_007_365G1_scaffold_1032_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14340..16970
DNA (2631bp) protein (877aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:CBL23825.1}; EC=2.7.9.1 {ECO:0000313|EMBL:CBL23825.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
pyruvate, phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FDBDFE
L1_007_365G1_scaffold_1032_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17435..17944
DNA (510bp) protein (170aa)
Endonuclease n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N381_9FIRM
Endonuclease {ECO:0000313|EMBL:CCY98243.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_007_365G1_scaffold_1032_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18086..18628
DNA (543bp) protein (181aa)
Acetyltransferase GNAT family n=1 Tax=Coprococcus comes CAG:19 RepID=R6LIN6_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDB85720.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
GNAT family acetyltransferase
L1_007_365G1_scaffold_1032_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18882..20222
DNA (1341bp) protein (447aa)
MATE efflux family protein n=2 Tax=Blautia RepID=A5ZWQ7_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL26181.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_365G1_scaffold_1032_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20440..21606
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33933.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter substrate-binding protein
L1_007_365G1_scaffold_1032_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21879..23420
DNA (1542bp) protein (514aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0K9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY33934.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter ATP-binding protein
L1_007_365G1_scaffold_1032_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23413..24543
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33935.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter permease protein
L1_007_365G1_scaffold_1032_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24543..25484
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33936.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter permease protein
L1_007_365G1_scaffold_1032_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25489..26268
DNA (780bp) protein (260aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
uridine phosphorylase (EC:2.4.2.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAE7_9FIRM
L1_007_365G1_scaffold_1032_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26512..27177
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVV2_9FIRM
L1_007_365G1_scaffold_1032_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27311..27730
DNA (420bp) protein (140aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0L2_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CCY33939.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1032_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27848..28828
DNA (981bp) protein (327aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW32_9FIRM
Adenosine deaminase {ECO:0000313|EMBL:CCY33940.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1032_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28854..30044
DNA (1191bp) protein (397aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAZ4_9FIRM
L1_007_365G1_scaffold_1032_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30161..30889
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33942.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
cyclic nucleotide-binding domain-containing protein
L1_007_365G1_scaffold_1032_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31009..31830
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVV8_9FIRM
L1_007_365G1_scaffold_1032_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31907..32827
DNA (921bp) protein (307aa)
Sugar kinases ribokinase family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0L7_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCY33944.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Sugar kinases, ribokinase family
L1_007_365G1_scaffold_1032_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32837..33460
DNA (624bp) protein (208aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW38_9FIRM
L1_007_365G1_scaffold_1032_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33622..34719
DNA (1098bp) protein (366aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IB00_9FIRM
L1_007_365G1_scaffold_1032_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34880..36649)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33948.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1032_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36835..37683
DNA (849bp) protein (283aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0M1_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCY33949.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1032_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37685..38980
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D5U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88878.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Na+/H+-dicarboxylate symporters
L1_007_365G1_scaffold_1032_30
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

39333..39704
DNA (372bp) protein (124aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CF32_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA63862.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Predicted transcriptional regulators
Displaying items 1-30 of 33 in total

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