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L1_007_365G1_scaffold_1132

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1132_1
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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1..405
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T4F8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD47072.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L1_007_365G1_scaffold_1132_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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592..1374
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G7X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05891.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Bacterial Ig-like domain (group 2).
L1_007_365G1_scaffold_1132_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1723..2685
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87671.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_365G1_scaffold_1132_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2760..3197
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87669.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Protein of unknown function (DUF3268).
L1_007_365G1_scaffold_1132_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3234..3887
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40245.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_007_365G1_scaffold_1132_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3901..4593
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH70_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19181.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1132_7
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4556..5062
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40243.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_007_365G1_scaffold_1132_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5085..5387
DNA (303bp) protein (101aa)
Cold-shock DNA-binding protein family n=2 Tax=Clostridiales RepID=D4LH71_9FIRM
cold-shock DNA-binding protein family
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:CBL19182.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1132_9
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5729..5860
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40064.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_007_365G1_scaffold_1132_10
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5877..6992
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH74_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19185.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1132_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7047..7733
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87655.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_365G1_scaffold_1132_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7750..8922
DNA (1173bp) protein (391aa)
Erf family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS57_9FIRM
Erf family protein {ECO:0000313|EMBL:EDM87654.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ERF superfamily.
L1_007_365G1_scaffold_1132_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8971..9897
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87653.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
CHC2 zinc finger.
L1_007_365G1_scaffold_1132_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9918..10226
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87653.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
CHC2 zinc finger.
L1_007_365G1_scaffold_1132_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10381..16773
DNA (6393bp) protein (2131aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BD13_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDM64330.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cna protein B-type domain.
L1_007_365G1_scaffold_1132_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16840..17568
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23107.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sortase B. Cysteine peptidase. MEROPS family C60B
L1_007_365G1_scaffold_1132_17
unknown

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17789..18250
DNA (462bp) protein (154aa)

This feature has no annotations

L1_007_365G1_scaffold_1132_18
unknown

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18275..18556
DNA (282bp) protein (94aa)

This feature has no annotations

L1_007_365G1_scaffold_1132_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18846..19409
DNA (564bp) protein (188aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWF5_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCY34178.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_365G1_scaffold_1132_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19399..20469
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34179.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1132_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20614..21735
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MN24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72193.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Transposase and inactivated derivatives
L1_007_365G1_scaffold_1132_22
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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22846..23829
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
L1_007_365G1_scaffold_1132_23
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23857..24864
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036ED187
D-alanine--D-alanine ligase
Tax=BJP_IG2157_Clostridiales_52_13
L1_007_365G1_scaffold_1132_24
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24871..27717)
DNA (2847bp) protein (949aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HKC5_9FIRM
TIR protein
Tax=BJP_IG2157_Clostridiales_52_13
Displaying 24 items

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