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L1_007_365G1_scaffold_1158

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1158_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..730
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FF3714
Uncharacterized protein {ECO:0000313|EMBL:EES76450.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_1158_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

720..1223
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EF836A
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EES76449.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sigma-70 family RNA polymerase sigma factor
L1_007_365G1_scaffold_1158_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1355..2068
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FE3A50
Predicted integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99781.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_007_365G1_scaffold_1158_4
Treponema sp. JC4, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2058..3047
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002ED4C70
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EID86343.1}; TaxID=1124982 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. JC4.;"
hypothetical protein
L1_007_365G1_scaffold_1158_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3076..3261)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003100327
Uncharacterized protein {ECO:0000313|EMBL:EES76446.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_1158_6
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3472..3981
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00036C56DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI69520.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
L1_007_365G1_scaffold_1158_7
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3991..5094
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E792F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI69521.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
L1_007_365G1_scaffold_1158_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5163..5894
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23107.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sortase B. Cysteine peptidase. MEROPS family C60B
L1_007_365G1_scaffold_1158_9
unknown

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6060..6524
DNA (465bp) protein (155aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_10
unknown

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6545..6823
DNA (279bp) protein (93aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6958..7521
DNA (564bp) protein (188aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWF5_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCY34178.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_365G1_scaffold_1158_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7622..8572
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34179.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1158_13
unknown

Not on your lists

8654..9178
DNA (525bp) protein (175aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_14
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9377..9919
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KU61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB77005.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L1_007_365G1_scaffold_1158_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9950..10147
DNA (198bp) protein (66aa)
Excisionase from transposon Tn916 n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LT64_9FIRM
Excisionase from transposon Tn916.
Excisionase from transposon Tn916 {ECO:0000313|EMBL:CBL23972.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_365G1_scaffold_1158_16
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10919..11203
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KY31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78395.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L1_007_365G1_scaffold_1158_17
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11269..11451
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KY31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78395.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L1_007_365G1_scaffold_1158_18
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11675..13192
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NCQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB87920.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
EA59 gene protein
L1_007_365G1_scaffold_1158_19
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13192..14055
DNA (864bp) protein (288aa)
HNH endonuclease n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K6W6_9FIRM
HNH endonuclease {ECO:0000313|EMBL:CDB66844.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
putative EA31 gene protein phage lambda
L1_007_365G1_scaffold_1158_20
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14106..15476
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B516D9
KAP family P-loop domain protein {ECO:0000313|EMBL:EFF68825.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
KAP family P-loop domain-containing protein
L1_007_365G1_scaffold_1158_21
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15619..16521)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KX07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48052.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L1_007_365G1_scaffold_1158_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16680..17186)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78702.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mobile element protein
L1_007_365G1_scaffold_1158_23
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17272..17868)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05189.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
nucleic acid-binding protein
L1_007_365G1_scaffold_1158_24
unknown

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comp(18547..18912)
DNA (366bp) protein (122aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_25
unknown

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comp(18899..19561)
DNA (663bp) protein (221aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_26
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19838..20530
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0ATI8_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK54469.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
L1_007_365G1_scaffold_1158_27
unknown

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20970..21143
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_365G1_scaffold_1158_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21119..21682
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH47_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM85645.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_007_365G1_scaffold_1158_29
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21797..21973
DNA (177bp) protein (59aa)
StbA protein n=3 Tax=Clostridiales RepID=D4LH48_9FIRM
StbA protein.
StbA protein {ECO:0000313|EMBL:CBL19159.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1158_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22074..22229
DNA (156bp) protein (52aa)
Transposase n=1 Tax=Lachnospiraceae bacterium 8_1_57FAA RepID=E5XJW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20046.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
Displaying 30 items

View Taxonomy