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L1_007_365G1_scaffold_1162

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1162_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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178..3678
DNA (3501bp) protein (1167aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III catalytic subunit DnaE type n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSY1_9FIRM
L1_007_365G1_scaffold_1162_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3885..4874
DNA (990bp) protein (330aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7T7_9FIRM
L1_007_365G1_scaffold_1162_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5073..6464
DNA (1392bp) protein (464aa)
H(+)-transporting two-sector ATPase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I787_9FIRM
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:CCY32852.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Trk-type K+ transport systems, membrane components
L1_007_365G1_scaffold_1162_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6540..7196
DNA (657bp) protein (219aa)
K+ transport systems NAD-binding component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSV7_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CCY32853.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
K+ transport systems, NAD-binding component
L1_007_365G1_scaffold_1162_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7212..7994
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75765.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rRNA methylases
L1_007_365G1_scaffold_1162_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8084..8518
DNA (435bp) protein (145aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7V6_9FIRM
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:CCY32866.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Membrane protein implicated in regulation of membrane protease activity
L1_007_365G1_scaffold_1162_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8520..9461
DNA (942bp) protein (314aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7A6_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CCY32867.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Membrane protease subunits, stomatin/prohibitin homologs
L1_007_365G1_scaffold_1162_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9485..10486
DNA (1002bp) protein (334aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSX2_9FIRM
L1_007_365G1_scaffold_1162_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10532..11461
DNA (930bp) protein (310aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXI2_9FIRM
Transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase {ECO:0000313|EMBL:CCY32869.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1162_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11588..11938
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32870.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1162_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12115..13071
DNA (957bp) protein (319aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
tRNA-dihydrouridine synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7W3_9FIRM
tRNA-U20-dihydrouridine synthase
L1_007_365G1_scaffold_1162_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13248..14612
DNA (1365bp) protein (455aa)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7B1_9FIRM
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:CCY32872.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
L1_007_365G1_scaffold_1162_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(14685..15926)
DNA (1242bp) protein (414aa)
Polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFQ9_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC47718.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
polysaccharide biosynthesis protein
L1_007_365G1_scaffold_1162_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(15961..17046)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y5M2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY23369.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1162_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17228..17464
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32873.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1162_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17728..18933
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM86999.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA-binding transcriptional activator of the SARP family
L1_007_365G1_scaffold_1162_17
Streptococcus intermedius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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19188..22190
DNA (3003bp) protein (1001aa)
Uncharacterized protein n=1 Tax=Streptococcus intermedius C270 RepID=T1ZGG9_STRIT
Uncharacterized protein {ECO:0000313|EMBL:EHG12005.1}; TaxID=857292 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus intermedius F0395.;"
hypothetical protein
Displaying 17 items

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