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L1_007_365G1_scaffold_1222

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1222_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..820
DNA (819bp) protein (273aa)
TRAP transporter, DctM subunit n=2 Tax=Clostridiales RepID=A5ZRH5_9FIRM
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDM87793.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_007_365G1_scaffold_1222_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(940..1533)
DNA (594bp) protein (198aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTZ5_9FIRM
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CCY33268.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1222_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1841..3316
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33267.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1222_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3581..4360)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8Z2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_365G1_scaffold_1222_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4505..4762)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HU41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33265.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
sporulation protein, YlmC/YmxH family
L1_007_365G1_scaffold_1222_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4964..5413
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HYP0_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
transcriptional regulator NrdR
L1_007_365G1_scaffold_1222_7
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5526..6860)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPM4_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1222_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7101..8318
DNA (1218bp) protein (406aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.-)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV18_9FIRM
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CCY33540.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1222_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8459..9823
DNA (1365bp) protein (455aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Citrate synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZJ6_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1222_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9826..10686
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96706.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_007_365G1_scaffold_1222_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10842..11345
DNA (504bp) protein (168aa)
HAD phosphatase family IIIA n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9A5_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CCY33537.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L1_007_365G1_scaffold_1222_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11342..11845
DNA (504bp) protein (168aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Blautia sp. CAG:257 RepID=R5XB67_9FIRM
L1_007_365G1_scaffold_1222_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11982..12539
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9W0_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
translation elongation factor P (EF-P)
L1_007_365G1_scaffold_1222_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12780..13787
DNA (1008bp) protein (336aa)
Oxidoreductase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV16_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CCY33535.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_007_365G1_scaffold_1222_15
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14007..14996
DNA (990bp) protein (330aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Coprococcus catus GD/7 RepID=D4J3S1_9FIRM
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBK78992.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_1222_16
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15191..16717
DNA (1527bp) protein (509aa)
ABC-type uncharacterized transport systems, ATPase components (EC:3.6.3.17)
ABC-type uncharacterized transport systems, ATPase components {ECO:0000313|EMBL:CBK78993.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CBK78993.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
ABC-type uncharacterized transport systems, ATPase components n=1 Tax=Coprococcus catus GD/7 RepID=D4J3S2_9FIRM
L1_007_365G1_scaffold_1222_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16717..17769
DNA (1053bp) protein (351aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Coprococcus catus GD/7 RepID=D4J3S3_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:CBK78994.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_1222_18
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17769..18710
DNA (942bp) protein (314aa)
Uncharacterized ABC-type transport system, permease component n=1 Tax=Coprococcus catus GD/7 RepID=D4J3S4_9FIRM
Uncharacterized ABC-type transport system, permease component
Uncharacterized ABC-type transport system, permease component {ECO:0000313|EMBL:CBK78995.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_365G1_scaffold_1222_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18719..19474
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45971.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transcriptional regulator
L1_007_365G1_scaffold_1222_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19531..20799
DNA (1269bp) protein (423aa)
Cytosine deaminase and related metal-dependent hydrolases (EC:3.5.4.3)
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CBK78996.1}; EC=3.5.4.3 {ECO:0000313|EMBL:CBK78996.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EAA6F6
Displaying 20 items

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