ggKbase home page

L1_007_365G1_scaffold_1279

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1279_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035D72EB
Uncharacterized protein {ECO:0000313|EMBL:ERI95907.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_1279_2
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

148..1407
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DD01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD88250.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_365G1_scaffold_1279_3
unknown

Not on your lists

1725..2945
DNA (1221bp) protein (407aa)

This feature has no annotations

L1_007_365G1_scaffold_1279_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3163..3708)
DNA (546bp) protein (182aa)
Ferredoxin hydrogenase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0Z1_9FIRM
Ferredoxin hydrogenase {ECO:0000313|EMBL:CCY34029.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Rubrerythrin
L1_007_365G1_scaffold_1279_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3938..4336)
DNA (399bp) protein (133aa)
Ferric uptake regulator family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW61_9FIRM
Ferric uptake regulator family protein {ECO:0000313|EMBL:CCY34028.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Fe2+/Zn2+ uptake regulation proteins
L1_007_365G1_scaffold_1279_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4910..6868
DNA (1959bp) protein (653aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCH9_9FIRM
L1_007_365G1_scaffold_1279_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6946..7452
DNA (507bp) protein (169aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVT8_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
GTP cyclohydrolase subunit MoaC
L1_007_365G1_scaffold_1279_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7449..7940
DNA (492bp) protein (164aa)
Molybdenum cofactor synthesis protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAN7_9FIRM
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:CCY33851.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
molybdopterin adenylyltransferase
L1_007_365G1_scaffold_1279_9
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8253..9062)
DNA (810bp) protein (270aa)
Peptidase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MTJ9_9FIRM
peptidase
Peptidase {ECO:0000313|EMBL:CDF04504.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_365G1_scaffold_1279_10
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9105..9497)
DNA (393bp) protein (131aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G2H5_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CCY11338.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L1_007_365G1_scaffold_1279_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9689..10465
DNA (777bp) protein (259aa)
hydrolase, TatD family (EC:3.1.21.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33852.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1279_12
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

10491..11351
DNA (861bp) protein (287aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YCN4_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDA14327.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L1_007_365G1_scaffold_1279_13
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

11348..11965
DNA (618bp) protein (206aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XZC0_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDA14326.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L1_007_365G1_scaffold_1279_14
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11962..13599
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JFY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27450.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
putative phosphoprotein phosphatase
L1_007_365G1_scaffold_1279_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13680..14327)
DNA (648bp) protein (216aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVJ6_9FIRM
L1_007_365G1_scaffold_1279_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14641..15996
DNA (1356bp) protein (452aa)
Uracil-xanthine permease n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0C1_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:CCY33854.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
uracil-xanthine permease
L1_007_365G1_scaffold_1279_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16275..17165)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33855.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1279_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17179..18267)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33856.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1279_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18294..19667)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33857.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Putative virion core protein (lumpy skin disease virus)
L1_007_365G1_scaffold_1279_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20245..21897)
DNA (1653bp) protein (551aa)
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVK0_9FIRM
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:CCY33858.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Bacterial capsule synthesis protein PGA_cap.
L1_007_365G1_scaffold_1279_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22128..23897)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33859.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1279_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24327..24884
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33860.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_365G1_scaffold_1279_23
unknown

Not on your lists

comp(25738..26898)
DNA (1161bp) protein (387aa)

This feature has no annotations

L1_007_365G1_scaffold_1279_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

27222..27599
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RV77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46926.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Displaying 24 items

View Taxonomy