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L1_007_365G1_scaffold_1300

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1300_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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154..654
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NSG8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77234.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_365G1_scaffold_1300_2

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1045..1377
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=G8FXJ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AET35494.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L1_007_365G1_scaffold_1300_3
unknown

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1478..1582
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_365G1_scaffold_1300_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1766..2743
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9I2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16277.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_365G1_scaffold_1300_5
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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2799..2987
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MBC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68300.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_365G1_scaffold_1300_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3047..3322
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH07_9FIRM
Protein of unknown function (DUF1648).
Uncharacterized protein {ECO:0000313|EMBL:CBL19118.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1300_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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3433..3705
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H8W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21216.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_007_365G1_scaffold_1300_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4109..4690
DNA (582bp) protein (194aa)
Single-stranded DNA-binding protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHA6_9FIRM
single stranded DNA-binding protein (ssb)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1300_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4677..5315
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHA7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19218.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1300_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5327..7546
DNA (2220bp) protein (740aa)
ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS54_9FIRM
Helicase, RecD/TraA family {ECO:0000313|EMBL:EDM87651.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_007_365G1_scaffold_1300_11
unknown

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7567..7677
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_365G1_scaffold_1300_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7616..9421
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87649.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
MoxR-like ATPases
L1_007_365G1_scaffold_1300_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9565..11580
DNA (2016bp) protein (672aa)
Nitric oxide reductase activation protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHB1_9FIRM
Nitric oxide reductase activation protein
Nitric oxide reductase activation protein {ECO:0000313|EMBL:CBL19222.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1300_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11597..12055
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87644.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_365G1_scaffold_1300_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12122..12322
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DFE0_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76414.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_1300_16
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12372..14537
DNA (2166bp) protein (722aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHB4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19225.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_1300_17
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14537..16744
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87642.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_365G1_scaffold_1300_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17610..17924
DNA (315bp) protein (105aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESU6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG37688.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_1300_19

Not on your lists

18202..18630
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SQU4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59958.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_365G1_scaffold_1300_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18750..19709)
DNA (960bp) protein (320aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Signal transduction histidine kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4JB78_9FIRM
Signal transduction histidine kinase
L1_007_365G1_scaffold_1300_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19706..20383)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BWH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19449.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
winged helix family two component transcriptional regulator
L1_007_365G1_scaffold_1300_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20403..20651)
DNA (249bp) protein (83aa)
Efflux ABC transporter, permease protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B8U7_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG90334.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted permease.
Displaying 22 items

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