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L1_007_365G1_scaffold_1465

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1465_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_365G1_scaffold_1465_2
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(125..1594)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9KFT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45324.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
RNA-directed DNA polymerase
L1_007_365G1_scaffold_1465_3
unknown

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2321..2536
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B30141
L1_007_365G1_scaffold_1465_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2830..3168)
DNA (339bp) protein (113aa)
TfoX N-terminal domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B8W0_9FIRM
TfoX N-terminal domain protein {ECO:0000313|EMBL:EEG90347.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Regulator of competence-specific genes
L1_007_365G1_scaffold_1465_5
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3202..3585)
DNA (384bp) protein (128aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CBK79712.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBK79712.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Lactoylglutathione lyase and related lyases n=1 Tax=Coprococcus catus GD/7 RepID=D4J5U1_9FIRM
L1_007_365G1_scaffold_1465_6
unknown

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comp(3582..3815)
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_365G1_scaffold_1465_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3903..4643)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JU68_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type multidrug transport system, permease component
L1_007_365G1_scaffold_1465_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4640..5110)
DNA (471bp) protein (157aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DFR5_CLOSC
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK76539.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_1465_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5170..5691
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33007.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1465_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5775..7148)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33008.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_1465_11
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7313..9340)
DNA (2028bp) protein (676aa)
Alpha-glucosidase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRM5_CLOSH
alpha-glucosidase
Glycoside hydrolase family 31 {ECO:0000313|EMBL:AGC68208.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_007_365G1_scaffold_1465_12
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9366..10199)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CSB3_PAESJ
ABC transporter inner membrane protein
ABC transporter inner membrane protein {ECO:0000313|EMBL:CDZ25123.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_365G1_scaffold_1465_13
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10196..11092)
DNA (897bp) protein (299aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FF43_9CLOT
ABC transporter inner membrane protein
ABC transporter inner membrane protein {ECO:0000313|EMBL:CDZ25122.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_365G1_scaffold_1465_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11187..12476)
DNA (1290bp) protein (430aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXC4_SPHGB
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:CDZ25121.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_365G1_scaffold_1465_15
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12644..14404
DNA (1761bp) protein (587aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3L2_9FIRM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDF44451.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L1_007_365G1_scaffold_1465_16
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14397..15149
DNA (753bp) protein (251aa)
Two component AraC family transcriptional regulator n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3Z1_9FIRM
Two component AraC family transcriptional regulator {ECO:0000313|EMBL:CDF44450.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L1_007_365G1_scaffold_1465_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15142..16005)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33009.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1465_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16137..17237)
DNA (1101bp) protein (367aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAF3_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CCY33776.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1465_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17239..18291)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33777.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type Fe3+-siderophore transport system, permease component
Displaying 19 items

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