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L1_007_365G1_scaffold_1555

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1555_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..3891)
DNA (3891bp) protein (1297aa)
Methyltransferase domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNX4_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEA82254.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA methylase
L1_007_365G1_scaffold_1555_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3910..6006)
DNA (2097bp) protein (699aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNX5_9CLOT
L1_007_365G1_scaffold_1555_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6099..6779)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82256.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_365G1_scaffold_1555_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6769..7107)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4LWP4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22047.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_365G1_scaffold_1555_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7125..9596)
DNA (2472bp) protein (824aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75167.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_365G1_scaffold_1555_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9629..9940)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FNX9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22046.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_365G1_scaffold_1555_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10035..12851)
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82260.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_365G1_scaffold_1555_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12829..13203)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75170.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_1555_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13221..14090)
DNA (870bp) protein (290aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FNY2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEA82262.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_007_365G1_scaffold_1555_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14114..14329)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75172.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_1555_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14464..15318)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75173.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Type IV secretory pathway, VirD4 components
L1_007_365G1_scaffold_1555_12
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15363..16475)
DNA (1113bp) protein (371aa)
Peptidase, M28 family {ECO:0000313|EMBL:EEG91440.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEG91440.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
putative Glutaminyl-peptide cyclotransferase (EC:2.3.2.5)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B7 RepID=R0CTP5_9CLOT
L1_007_365G1_scaffold_1555_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16925..18304)
DNA (1380bp) protein (460aa)
Virulence-associated protein E n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QHM6_9FIRM
Virulence-associated protein E {ECO:0000313|EMBL:ERK40813.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted P-loop ATPase and inactivated derivatives
L1_007_365G1_scaffold_1555_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18276..18929)
DNA (654bp) protein (218aa)
CHC2 zinc finger domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PAT8_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERK40814.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
DNA primase (bacterial type)
L1_007_365G1_scaffold_1555_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19036..19620)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P9K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40816.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
Displaying 15 items

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