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L1_007_365G1_scaffold_1902

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1902_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(195..2621)
DNA (2427bp) protein (809aa)
Protein translocase subunit secF/protein translocase subunit secD n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV28_9FIRM
Protein translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:CCY33673.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
protein translocase subunit secF/protein translocase subunit secD
L1_007_365G1_scaffold_1902_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2695..4062)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33672.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_365G1_scaffold_1902_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4149..4289)
DNA (141bp) protein (47aa)
RSAM-modified six-cysteine peptide n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA66_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:CCY33671.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1902_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4418..4768)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33670.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1902_5
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4857..7013)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XEZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA07006.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L1_007_365G1_scaffold_1902_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7718..9004
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32194.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1902_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..9724)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32193.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1902_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9815..10579)
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32192.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_1902_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10747..11724
DNA (978bp) protein (326aa)
ABC transporter substrate binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5Z1_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCY32191.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type uncharacterized transport system, periplasmic component
L1_007_365G1_scaffold_1902_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12279..13205
DNA (927bp) protein (309aa)
ABC-type uncharacterized transport system permease component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR33_9FIRM
ABC-type uncharacterized transport system permease component {ECO:0000313|EMBL:CCY32190.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type uncharacterized transport system, permease component
L1_007_365G1_scaffold_1902_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13198..13992
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32189.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type uncharacterized transport system, ATPase component
L1_007_365G1_scaffold_1902_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..15122)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32188.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_1902_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15589..17193)
DNA (1605bp) protein (535aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBL20158.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E81CB0
L1_007_365G1_scaffold_1902_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17670..18146)
DNA (477bp) protein (159aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80424.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_1902_15
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18362..19576)
DNA (1215bp) protein (405aa)
DNA binding domain of tn916 integrase / site-specific recombinase phage integrase family multi-domain protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KYQ6_9FIRM
DNA binding domain of tn916 integrase / site-specific recombinase phage integrase family multi-domain protein {ECO:0000313|EMBL:CDB76344.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_1902_16
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19681..19893)
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Blautia RepID=R6KS81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB76345.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Excisionase from transposon Tn916.
Displaying 16 items

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