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L1_007_365G1_scaffold_2633

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_2633_1
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(1..213)
DNA (213bp) protein (71aa)
Transcriptional regulator ArsR family n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YFC3_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDA15257.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
transcriptional regulator (ArsR family)
L1_007_365G1_scaffold_2633_2
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(571..1401)
DNA (831bp) protein (277aa)
Ethanolamine utilization protein EutJ family protein n=2 Tax=Clostridiales RepID=A5ZML6_9FIRM
Ethanolamine utilization protein EutJ family protein {ECO:0000313|EMBL:CDD87423.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
ethanolamine utilization protein EutJ family protein
L1_007_365G1_scaffold_2633_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1561..1974)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NI92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96832.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_007_365G1_scaffold_2633_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1999..2592
DNA (594bp) protein (198aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVT9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY33928.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulator
L1_007_365G1_scaffold_2633_5
unknown

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2771..3055
DNA (285bp) protein (95aa)

This feature has no annotations

L1_007_365G1_scaffold_2633_6
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3490..3969
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z788_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73166.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L1_007_365G1_scaffold_2633_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4014..4946
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TY32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63876.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L1_007_365G1_scaffold_2633_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5009..5665
DNA (657bp) protein (219aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSU5_9FIRM
L1_007_365G1_scaffold_2633_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5691..6089
DNA (399bp) protein (133aa)
Protein-tyrosine-phosphatase (EC:1.20.4.1)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL20681.1}; EC=1.20.4.1 {ECO:0000313|EMBL:CBL20681.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Protein-tyrosine-phosphatase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLH0_9FIRM
L1_007_365G1_scaffold_2633_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6183..6983
DNA (801bp) protein (267aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA polymerase IV n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWS1_9FIRM
DNA-directed DNA polymerase
L1_007_365G1_scaffold_2633_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7141..7731)
DNA (591bp) protein (197aa)
Transposase DDE domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSM1_9FIRM
Transposase DDE domain.
Transposase DDE domain {ECO:0000313|EMBL:CBL09873.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_365G1_scaffold_2633_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7704..8030)
DNA (327bp) protein (109aa)
Transposase DDE domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSM1_9FIRM
Transposase DDE domain.
Transposase DDE domain {ECO:0000313|EMBL:CBL09873.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying 12 items

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