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L1_007_365G1_scaffold_2642

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_2642_1
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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388..951
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z7S6_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73354.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L1_007_365G1_scaffold_2642_2
unknown

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902..1090
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

L1_007_365G1_scaffold_2642_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1092..1511
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33477.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_2642_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1946..2923
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33478.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_2642_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3020..3250
-----------------
DNA (231bp)
protein (77aa)
Transcriptional regulator XRE family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZ96_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCY33479.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted transcriptional regulator
L1_007_365G1_scaffold_2642_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3240..4337
-----------------
DNA (1098bp)
protein (366aa)
Putative lipoprotein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUS8_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CCY33480.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_2642_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5339..6931
-----------------
DNA (1593bp)
protein (531aa)
Extracellular solute-binding protein family 5 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R382_CLOSW
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADL04831.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_365G1_scaffold_2642_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7044..8072
-----------------
DNA (1029bp)
protein (343aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQD8_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCY31940.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_2642_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8075..8998
-----------------
DNA (924bp)
protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUZ8_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCY31939.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_2642_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9007..10005
-----------------
DNA (999bp)
protein (333aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQB4_9FIRM
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:CCY31938.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_007_365G1_scaffold_2642_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9995..10972
-----------------
DNA (978bp)
protein (326aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4K9_9FIRM
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:CCY31937.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_007_365G1_scaffold_2642_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11132..11893
-----------------
DNA (762bp)
protein (254aa)
DeoR faimly transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000372E27E
Transcriptional regulators of sugar metabolism
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCY97140.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_007_365G1_scaffold_2642_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12032..12778
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4Z7_9FIRM
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:CCY31866.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized protein involved in copper resistance
Displaying 13 items

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