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L1_007_365G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_152_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

300..797
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32747.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Bacterial SH3 domain.
L1_007_365G1_scaffold_152_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(949..1428)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSK5_9FIRM
L1_007_365G1_scaffold_152_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1595..2398
DNA (804bp) protein (268aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6X6_9FIRM
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
L1_007_365G1_scaffold_152_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2524..3084)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32753.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L1_007_365G1_scaffold_152_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3407..4606
DNA (1200bp) protein (400aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBH3_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EES77960.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_152_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4835..5485
DNA (651bp) protein (217aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSN7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY32755.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted membrane protein
L1_007_365G1_scaffold_152_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5564..6337
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7J6_9FIRM
L1_007_365G1_scaffold_152_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6420..7310)
DNA (891bp) protein (297aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6Y1_9FIRM
L1_007_365G1_scaffold_152_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7504..8847
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32758.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_152_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9193..10368
DNA (1176bp) protein (392aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBG9_9FIRM
cobalamin biosynthesis protein CbiD
L1_007_365G1_scaffold_152_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10492..11175
DNA (684bp) protein (228aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSP0_9FIRM
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase {ECO:0000313|EMBL:CCY32760.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11283..12041
DNA (759bp) protein (253aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C(11)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7K2_9FIRM
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:CCY32761.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_13
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12103..13194
DNA (1092bp) protein (364aa)
Cobalamin biosynthesis protein CbiG n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQB5_9FIRM
Cobalamin biosynthesis protein CbiG {ECO:0000313|EMBL:CDE29260.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Cobalamin biosynthesis protein CbiG
L1_007_365G1_scaffold_152_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13187..13927
DNA (741bp) protein (247aa)
Precorrin-3B C17-methyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSL9_9FIRM
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:CCY32763.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
precorrin-3B C17-methyltransferase
L1_007_365G1_scaffold_152_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13920..15965
DNA (2046bp) protein (682aa)
precorrin-6x reductase (EC:2.1.1.132)
Precorrin-6x reductase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX83_9FIRM
Precorrin-6x reductase {ECO:0000313|EMBL:CCY32764.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16030..17532
DNA (1503bp) protein (501aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSP4_9FIRM
cobyrinic acid a,c-diamide synthase
L1_007_365G1_scaffold_152_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17529..18494
DNA (966bp) protein (322aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7K8_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18594..19658
DNA (1065bp) protein (355aa)
L-threonine O-3-phosphate decarboxylase (EC:4.1.1.81)
L-threonine O-3-phosphate decarboxylase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6Z1_9FIRM
L-threonine O-3-phosphate decarboxylase {ECO:0000313|EMBL:CCY32767.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19674..21182
DNA (1509bp) protein (503aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSM3_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21185..21826
DNA (642bp) protein (214aa)
Precorrin isomerase (EC:5.4.1.2)
Precorrin isomerase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX89_9FIRM
Precorrin isomerase {ECO:0000313|EMBL:CCY32769.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21878..23206)
DNA (1329bp) protein (443aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSP9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY32770.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L1_007_365G1_scaffold_152_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23316..24182
DNA (867bp) protein (289aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal/pyridoxine/pyridoxamine kinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7L3_9FIRM
L1_007_365G1_scaffold_152_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24208..24849
DNA (642bp) protein (214aa)
Radical SAM-superfamily protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6Z6_9FIRM
Radical SAM-superfamily protein {ECO:0000313|EMBL:CCY32772.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Radical SAM superfamily.
L1_007_365G1_scaffold_152_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25017..25799)
DNA (783bp) protein (261aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32773.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_152_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(26294..27196)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21907.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Abortive infection bacteriophage resistance protein
L1_007_365G1_scaffold_152_26
unknown

Not on your lists

27573..27677
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_365G1_scaffold_152_27
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28070..29578
DNA (1509bp) protein (503aa)
Type I restriction-modification system DNA methylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDK6_9CLOT
Type I restriction-modification system DNA methylase {ECO:0000313|EMBL:CDA62288.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
type I restriction-modification system DNA methylase
L1_007_365G1_scaffold_152_28
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29568..30683
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B511_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32240.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
restriction endonuclease S subunit
L1_007_365G1_scaffold_152_29
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30794..31780
DNA (987bp) protein (329aa)
Phage integrase, SAM-like domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2U8W4_9FIRM
Phage integrase, SAM-like domain protein {ECO:0000313|EMBL:ERL21444.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_152_30
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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31796..32356
DNA (561bp) protein (187aa)
Restriction modification system DNA specificity domain-containing protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J0F9_9GAMM
Type I restriction-modification system specificity subunit
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:AKB75081.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
Displaying items 1-30 of 89 in total

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