ggKbase home page

L1_007_365G1_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_298_1
unknown

Not on your lists

1..186
DNA (186bp) protein (62aa)

This feature has no annotations

L1_007_365G1_scaffold_298_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

398..1384
DNA (987bp) protein (329aa)
Conserved domain protein (Fragment) n=1 Tax=Ruminococcus albus 8 RepID=E9S7N3_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC04714.1}; Flags: Fragment;; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
ABC transporter
L1_007_365G1_scaffold_298_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1558..1806
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=3 Tax=Clostridiales RepID=R5G138_9CLOT
Prevent-host-death family protein {ECO:0000313|EMBL:CCY13782.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
prevent-host-death family protein
L1_007_365G1_scaffold_298_4
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1808..2107
DNA (300bp) protein (100aa)
toxin RelE n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F0358B
Addiction module toxin RelE/StbE family {ECO:0000313|EMBL:CCY09573.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Plasmid stabilization system protein
L1_007_365G1_scaffold_298_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2473..3957
DNA (1485bp) protein (495aa)
TIGR02677 family protein n=2 Tax=Roseburia RepID=C7G9S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54700.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
conserved hypothetical protein TIGR02677
L1_007_365G1_scaffold_298_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3957..5099
DNA (1143bp) protein (381aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B112_9FIRM
conserved hypothetical protein TIGR02678
Uncharacterized protein {ECO:0000313|EMBL:CBL13691.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_298_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5089..9204
DNA (4116bp) protein (1372aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L252_9FIRM
conserved hypothetical protein TIGR02680
Uncharacterized protein {ECO:0000313|EMBL:CBL13692.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_298_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9182..10480
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BMY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54697.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_007_365G1_scaffold_298_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10519..12465
DNA (1947bp) protein (649aa)
hydroxymyristoyl-ACP dehydratase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E11516
5'-nucleotidase protein {ECO:0000313|EMBL:ERI98033.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L1_007_365G1_scaffold_298_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12572..12904)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZ57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33444.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_298_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13304..14341
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HS95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32623.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_298_12
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14350..14790)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D999_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD86761.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_365G1_scaffold_298_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14787..15551)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78647.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_298_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15763..17283
DNA (1521bp) protein (507aa)
dipeptidase A. Cysteine peptidase. MEROPS family C69 (EC:3.4.-.-)
Dipeptidase A. Cysteine peptidase. MEROPS family C69 n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I796_9FIRM
Dipeptidase A. Cysteine peptidase. MEROPS family C69 {ECO:0000313|EMBL:CCY32626.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_298_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17403..17756
DNA (354bp) protein (118aa)
Hpt domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6L5_9FIRM
Hpt domain protein {ECO:0000313|EMBL:CCY32627.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Hpt domain.
L1_007_365G1_scaffold_298_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17844..18185
DNA (342bp) protein (114aa)
Azaleucine resistance protein AzlC n=1 Tax=Clostridium sp. ASF502 RepID=N2AD13_9CLOT
Azaleucine resistance protein AzlC {ECO:0000313|EMBL:EMZ23990.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L1_007_365G1_scaffold_298_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18332..19510
DNA (1179bp) protein (393aa)
Cystathionine beta-lyases/cystathionine gamma-synthases (EC:2.5.1.48)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWX2_9FIRM
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:CCY32629.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_298_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19491..20666
DNA (1176bp) protein (392aa)
Hemolysin n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSC3_9FIRM
Hemolysin {ECO:0000313|EMBL:CCY32630.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
class I and II aminotransferase
L1_007_365G1_scaffold_298_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20750..21385
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I797_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32631.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_298_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21501..21950)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32632.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_298_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21954..22712)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32633.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_298_22
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23049..24206
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60575.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
glycosyl transferase
L1_007_365G1_scaffold_298_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

24241..25320
DNA (1080bp) protein (360aa)
Acyltransferase 3 n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BPE6_9FIRM
Acyltransferase 3 {ECO:0000313|EMBL:CDA65060.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
acyltransferase 3
L1_007_365G1_scaffold_298_24
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25497..26576
DNA (1080bp) protein (360aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDO58302.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDO58302.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP0_9CLOT
glycosyl transferase GT2 family
L1_007_365G1_scaffold_298_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26632..27891)
DNA (1260bp) protein (420aa)
Nucleic acid-binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUW3_9FIRM
Nucleic acid-binding domain protein {ECO:0000313|EMBL:EDM86648.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_007_365G1_scaffold_298_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

28022..28690
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 PF2_9FIRM">RepID=R6BPF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA65070.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L1_007_365G1_scaffold_298_27
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28674..30587
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60573.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_365G1_scaffold_298_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30614..32059
DNA (1446bp) protein (482aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUX1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDM86656.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_365G1_scaffold_298_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32079..32957
DNA (879bp) protein (293aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDM86657.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM86657.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUX2_9FIRM
Glycosyltransferases, probably involved in cell wall biogenesis
L1_007_365G1_scaffold_298_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32954..34048
DNA (1095bp) protein (365aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDM86658.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM86658.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUX3_9FIRM
glycosyl transferases group 1 family protein
Displaying items 1-30 of 136 in total

View Taxonomy