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L1_007_365G1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_451_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1927
DNA (1926bp) protein (642aa)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL23363.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL23363.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
beta-glucosidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E63B5C
L1_007_365G1_scaffold_451_2
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1981..2280
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEX69932.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
hypothetical protein
L1_007_365G1_scaffold_451_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2288..2722)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031C6E76
Ferric uptake regulation protein {ECO:0000313|EMBL:EEG35619.1}; Flags: Fragment;; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
putative Fur family transcriptional regulator
L1_007_365G1_scaffold_451_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2950..3159
DNA (210bp) protein (70aa)
Zinc ABC transporter substrate-binding protein n=8 Tax=Clostridium RepID=N9V6S5_9CLOT
periplasmic solute binding protein
Uncharacterized protein {ECO:0000313|EMBL:EDP17614.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L1_007_365G1_scaffold_451_5
unknown

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3128..3292
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_365G1_scaffold_451_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3649..4746
DNA (1098bp) protein (366aa)
Predicted multitransmembrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIE7_9FIRM
Predicted multitransmembrane protein {ECO:0000313|EMBL:CCY96887.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted multitransmembrane protein
L1_007_365G1_scaffold_451_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4746..5525
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CME0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78548.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
YibE/F-like protein.
L1_007_365G1_scaffold_451_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5878..7686
DNA (1809bp) protein (603aa)
Na+/phosphate symporter n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LRW9_9FIRM
Na+/phosphate symporter {ECO:0000313|EMBL:CBL23527.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Na+/phosphate symporter
L1_007_365G1_scaffold_451_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8008..8286)
DNA (279bp) protein (93aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJE1_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL21177.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_365G1_scaffold_451_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8392..8607
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33712.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_451_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8844..10385)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVF9_9FIRM
L1_007_365G1_scaffold_451_12
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10650..11951)
DNA (1302bp) protein (434aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DEAA56
L1_007_365G1_scaffold_451_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12283..13626
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33709.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_451_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13947..15962
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33708.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L1_007_365G1_scaffold_451_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16122..16418
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33707.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_451_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16629..17243)
DNA (615bp) protein (205aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA97_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCY33706.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_451_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17553..18245
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVF4_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
sugar fermentation stimulation protein
L1_007_365G1_scaffold_451_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18242..19282
DNA (1041bp) protein (347aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33704.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_451_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19394..20410
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33703.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_365G1_scaffold_451_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20565..21254)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33702.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
PAP2 superfamily.
L1_007_365G1_scaffold_451_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21324..22256)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZ14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32325.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_007_365G1_scaffold_451_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22562..24760
DNA (2199bp) protein (733aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVF0_9FIRM
L1_007_365G1_scaffold_451_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24975..25646
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33699.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterised protein family (UPF0153).
L1_007_365G1_scaffold_451_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26061..27545
DNA (1485bp) protein (495aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATP-dependent Lon protease bacterial type n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV53_9FIRM
ATP-dependent Lon protease bacterial type {ECO:0000313|EMBL:CCY33698.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_451_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27636..28142
DNA (507bp) protein (169aa)
ADP-ribose pyrophosphatase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9P0_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CCY33697.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ADP-ribose pyrophosphatase
L1_007_365G1_scaffold_451_26
unknown

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28470..28646
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_365G1_scaffold_451_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28600..28896
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33696.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_451_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28865..29647
DNA (783bp) protein (261aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVE6_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY33695.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_451_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29640..30647
DNA (1008bp) protein (336aa)
NMT1/THI5-like protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZW6_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CCY33694.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
NMT1/THI5-like domain-containing protein
L1_007_365G1_scaffold_451_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30762..31514
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV47_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY33693.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC transporter
Displaying items 1-30 of 55 in total

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