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L1_007_365G1_scaffold_636

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_636_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

294..971
DNA (678bp) protein (226aa)
RelA/SpoT domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HS48_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CCY32530.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_636_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1133..1462)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I720_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32531.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_636_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1528..2535)
DNA (1008bp) protein (336aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0P6_ROSHA
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN95728.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_636_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2528..3724)
DNA (1197bp) protein (399aa)
ABC transporter ATP-binding protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B59984
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN95727.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_636_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3733..5475)
DNA (1743bp) protein (581aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KKN0_CLOPH
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX41201.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_365G1_scaffold_636_6
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5486..6472)
DNA (987bp) protein (329aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6V6_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDF45813.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
binding-protein-dependent transport systems inner membrane component
L1_007_365G1_scaffold_636_7
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6744..9005)
DNA (2262bp) protein (754aa)
Extracellular solute-binding protein family 5 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KKM8_CLOPH
extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABX41199.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_365G1_scaffold_636_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9208..9777)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32418.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_636_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9858..11534)
DNA (1677bp) protein (559aa)
Putative oligoendopeptidase F n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5Z6_9FIRM
Putative oligoendopeptidase F {ECO:0000313|EMBL:CCY32417.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligoendopeptidase, M3 family
L1_007_365G1_scaffold_636_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11727..13031)
DNA (1305bp) protein (435aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6K3_9FIRM
Trigger factor {ECO:0000313|EMBL:CCY32416.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_636_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13272..14264)
DNA (993bp) protein (331aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRR2_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCY32415.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter permease protein
L1_007_365G1_scaffold_636_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14265..15362)
DNA (1098bp) protein (366aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW87_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCY32414.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter permease protein
L1_007_365G1_scaffold_636_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15363..16895)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32413.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_636_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17160..18464)
DNA (1305bp) protein (435aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5Y9_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCY32412.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter substrate-binding protein
L1_007_365G1_scaffold_636_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18643..19626)
DNA (984bp) protein (328aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6J4_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCY32411.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AraC-type DNA-binding domain-containing proteins
L1_007_365G1_scaffold_636_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19808..21832)
DNA (2025bp) protein (675aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRQ6_9FIRM
L1_007_365G1_scaffold_636_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21909..25070)
DNA (3162bp) protein (1054aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW82_9FIRM
L1_007_365G1_scaffold_636_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25264..26091)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32408.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_636_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26084..26983)
DNA (900bp) protein (300aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5Y5_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY32407.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
lactose transport system (permease)
L1_007_365G1_scaffold_636_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27215..28501)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77513.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_636_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28789..29301)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32406.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_636_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29303..30235)
DNA (933bp) protein (311aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRQ2_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCY32405.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AraC-type DNA-binding domain-containing proteins
L1_007_365G1_scaffold_636_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30353..30736
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32404.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_636_24
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30949..31971)
DNA (1023bp) protein (341aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DE09CC
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CDA04803.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_636_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32131..33135)
DNA (1005bp) protein (335aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM15_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDM88909.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_636_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33138..34133)
DNA (996bp) protein (332aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LR59_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL23267.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_365G1_scaffold_636_27
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34133..35644)
DNA (1512bp) protein (504aa)
D-ribose transporter ATP binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030E7D94
Sugar ABC transporter ATP binding protein {ECO:0000313|EMBL:CDD87235.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
ABC transporter
L1_007_365G1_scaffold_636_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35964..37511
DNA (1548bp) protein (516aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWA6_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CCY34108.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_365G1_scaffold_636_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37581..39410
DNA (1830bp) protein (610aa)
Predicted signal transduction protein with a C-terminal ATPase domain n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAY8_9FIRM
Predicted signal transduction protein with a C-terminal ATPase domain {ECO:0000313|EMBL:CCY34107.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted signal transduction protein with a C-terminal ATPase domain
L1_007_365G1_scaffold_636_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39536..40954)
DNA (1419bp) protein (473aa)
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763, ECO:0000313|EMBL:CBL23262.1}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763, ECO:0000313|EMBL:CBL23262.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L-arabinose isomerase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LR54_9FIRM
Displaying items 1-30 of 46 in total

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