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L1_007_365G1_scaffold_875

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_875_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(77..223)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BAR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ61821.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_007_365G1_scaffold_875_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(290..1633)
DNA (1344bp) protein (448aa)
SNF2 family N-terminal domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR56_9CLOT
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EFR38663.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
SNF2 domain-containing protein
L1_007_365G1_scaffold_875_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1614..1895)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BAR7_9FIRM
VRR-NUC domain protein {ECO:0000313|EMBL:EQJ61823.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_007_365G1_scaffold_875_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2035..4308)
DNA (2274bp) protein (758aa)
Phage/plasmid primase, P4 family, C-terminal domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P2A2_CLODI
Phage/plasmid primase, P4 family, C-terminal domain protein {ECO:0000313|EMBL:EQJ61824.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phage/plasmid DNA primase
L1_007_365G1_scaffold_875_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4308..4637)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38742.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L1_007_365G1_scaffold_875_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4641..5060)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4P2Z6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ61826.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_007_365G1_scaffold_875_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5211..5786)
DNA (576bp) protein (192aa)
Putative DNA-directed DNA polymerase {ECO:0000313|EMBL:EFR38715.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR38715.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Putative DNA-directed DNA polymerase n=1 Tax=Clostridium sp. HGF2 RepID=E4LR51_9CLOT
family A DNA-dependent DNA polymerase
L1_007_365G1_scaffold_875_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5774..7150)
DNA (1377bp) protein (459aa)
DNA polymerase I-3'-5' exonuclease and polymerase domains (EC:2.7.7.7)
DNA polymerase A family protein n=1 Tax=Clostridium difficile P28 RepID=T4P2K8_CLODI
DNA polymerase A family protein {ECO:0000313|EMBL:EQJ61827.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L1_007_365G1_scaffold_875_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7205..7390)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NWH5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ61828.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_007_365G1_scaffold_875_10
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7456..7644)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26948.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L1_007_365G1_scaffold_875_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7660..8232)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D2J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ52466.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L1_007_365G1_scaffold_875_12
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8225..9364)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26946.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L1_007_365G1_scaffold_875_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9366..9686)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38675.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L1_007_365G1_scaffold_875_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9976..10494)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NWH9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ61833.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_007_365G1_scaffold_875_15
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10738..11025)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SM10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP61431.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L1_007_365G1_scaffold_875_16
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11172..11957
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46498.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L1_007_365G1_scaffold_875_17
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11972..12181
DNA (210bp) protein (70aa)
DNA binding domain, excisionase family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LB49_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFR61140.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
excisionase family DNA binding domain-containing protein
L1_007_365G1_scaffold_875_18
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12265..14268
DNA (2004bp) protein (668aa)
N-6 DNA Methylase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SM07_9FIRM
N-6 DNA Methylase {ECO:0000313|EMBL:EFP61428.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
N-6 DNA methylase
L1_007_365G1_scaffold_875_19
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14268..15641
DNA (1374bp) protein (458aa)
Restriction modification system DNA specificity domain n=3 Tax=Thermoanaerobacter RepID=B0K6N9_THEPX
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ABY92515.1}; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. (strain X514).;"
L1_007_365G1_scaffold_875_20
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15644..18697
DNA (3054bp) protein (1018aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LB53_9FIRM
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EFR61105.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein
L1_007_365G1_scaffold_875_21
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18713..19642
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46493.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L1_007_365G1_scaffold_875_22
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19639..22278
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F8D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46492.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
helicase domain-containing protein
L1_007_365G1_scaffold_875_23
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22278..24098
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46491.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L1_007_365G1_scaffold_875_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24122..25471
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38705.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Predicted metal-binding protein related to the C-terminal domain of SecA
L1_007_365G1_scaffold_875_25
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25536..26573
DNA (1038bp) protein (346aa)
Toxin-antitoxin system, toxin component, Fic family n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T8D8_9FIRM
Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EGL37111.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
hypothetical protein
L1_007_365G1_scaffold_875_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26925..27266
DNA (342bp) protein (114aa)
rumA1; putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCU3_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EGG81303.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L1_007_365G1_scaffold_875_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27345..27716
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QYU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93027.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_365G1_scaffold_875_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27713..27886
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV09_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENY88153.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L1_007_365G1_scaffold_875_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28155..29552
DNA (1398bp) protein (466aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WUJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13292.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Predicted ATPase (AAA+ superfamily)
L1_007_365G1_scaffold_875_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29554..30228
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037AAB11
Transporter {ECO:0000313|EMBL:KJF38745.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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