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L1_007_365G1_scaffold_914

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_914_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1182)
-----------------
DNA (1182bp)
protein (394aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDS05798.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDS05798.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
aspS3; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI50_CLOSV
L1_007_365G1_scaffold_914_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1521..2603)
-----------------
DNA (1083bp)
protein (361aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KML7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35954.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
asparaginase/glutaminase
L1_007_365G1_scaffold_914_3
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2866..3186)
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NPP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF15389.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
L1_007_365G1_scaffold_914_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3138..3575)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31850.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L1_007_365G1_scaffold_914_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3826..3999)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F45B1
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:EGB92754.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_914_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4758..4916
-----------------
DNA (159bp)
protein (53aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Clostridium sp. D5 RepID=F0YZ93_9CLOT
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EGB92748.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_365G1_scaffold_914_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5056..6075)
-----------------
DNA (1020bp)
protein (340aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTH8_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49496.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L1_007_365G1_scaffold_914_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6199..6522)
-----------------
DNA (324bp)
protein (108aa)
Site-specific recombinase, resolvase family n=2 Tax=root RepID=F0YZ91_9CLOT
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:EGB92746.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_365G1_scaffold_914_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6586..7047)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07962.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L1_007_365G1_scaffold_914_10
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7252..7605)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A6J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ19979.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_007_365G1_scaffold_914_11
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7647..11390)
-----------------
DNA (3744bp)
protein (1248aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BN02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82507.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L1_007_365G1_scaffold_914_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11575..11670)
-----------------
DNA (96bp)
protein (32aa)
Site-specific recombinase, resolvase family n=1 Tax=Clostridium sp. D5 RepID=F0YZ99_9CLOT
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:EGB92754.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Fusion of rumA/CD3393 and CD1844A
L1_007_365G1_scaffold_914_13
unknown

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comp(11951..12529)
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

L1_007_365G1_scaffold_914_14
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12815..14527)
-----------------
DNA (1713bp)
protein (571aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46586.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_365G1_scaffold_914_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14666..14830)
-----------------
DNA (165bp)
protein (55aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=U5F887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18453.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_007_365G1_scaffold_914_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15031..17352
-----------------
DNA (2322bp)
protein (774aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=U5F8M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18454.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Archaeal ATPase.
L1_007_365G1_scaffold_914_17
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17412..19493)
-----------------
DNA (2082bp)
protein (694aa)
Heavy metal translocating P-type ATPase n=4 Tax=Firmicutes RepID=E5XJQ1_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EFE46589.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L1_007_365G1_scaffold_914_18
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19501..19803)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=U5F893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82545.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L1_007_365G1_scaffold_914_19
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20013..20246)
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=U5F7P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46591.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Fe2+/Zn2+ uptake regulation proteins
L1_007_365G1_scaffold_914_20
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20278..20655)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46592.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Copper chaperone
L1_007_365G1_scaffold_914_21
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20738..22744)
-----------------
DNA (2007bp)
protein (669aa)
Ferrous iron transporter B n=4 Tax=Firmicutes RepID=E5XJQ6_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:EFE46593.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
ferrous iron transporter FeoB
L1_007_365G1_scaffold_914_22
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22846..23058)
-----------------
DNA (213bp)
protein (71aa)
FeoA domain-containing protein n=5 Tax=Firmicutes RepID=E5XJQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82549.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
FeoA domain.
L1_007_365G1_scaffold_914_23
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23296..23655
-----------------
DNA (360bp)
protein (120aa)
Iron-dependent transcriptional regulator n=4 Tax=Firmicutes RepID=E5XJQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82550.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Mn-dependent transcriptional regulator
L1_007_365G1_scaffold_914_24
unknown

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comp(23753..23947)
-----------------
DNA (195bp)
protein (65aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JGR8_9FIRM
L1_007_365G1_scaffold_914_25
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23944..24555)
-----------------
DNA (612bp)
protein (204aa)
UbiE/COQ5 family methyltransferase n=4 Tax=Firmicutes RepID=E5XJQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82551.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_365G1_scaffold_914_26
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24617..24898)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=R5QY51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82552.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Uncharacterized protein conserved in bacteria (DUF2325).
L1_007_365G1_scaffold_914_27
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25056..25478)
-----------------
DNA (423bp)
protein (141aa)
Flavodoxin n=5 Tax=Firmicutes RepID=E5XJR1_9FIRM
Flavodoxin {ECO:0000313|EMBL:EHO82553.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
flavodoxin
L1_007_365G1_scaffold_914_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25509..26060)
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=R5QAE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18466.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_914_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26592..27095
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=R5QH86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25674.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Replication initiator protein A (RepA) N-terminus.
L1_007_365G1_scaffold_914_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27092..27922
-----------------
DNA (831bp)
protein (277aa)
Replicative DNA helicase n=5 Tax=Firmicutes RepID=E5XJR4_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:EFV18468.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
phage DNA replication protein (predicted replicative helicase loader)
Displaying items 1-30 of 32 in total

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