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L1_007_365G1_scaffold_938

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_938_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..907)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZXX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM85573.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Protein kinase domain.
L1_007_365G1_scaffold_938_2
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1127..1552
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DEA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD88248.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_365G1_scaffold_938_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1992..3215
DNA (1224bp) protein (408aa)
Sodium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWH2_9FIRM
Sodium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CCY34030.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L1_007_365G1_scaffold_938_4
unknown

Not on your lists

comp(3284..4213)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P552_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39124.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_365G1_scaffold_938_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4490..5686
DNA (1197bp) protein (399aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBB4_9FIRM
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CCY34031.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L1_007_365G1_scaffold_938_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5753..6748)
DNA (996bp) protein (332aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77478.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_938_7
unknown

Not on your lists

comp(6778..6888)
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_365G1_scaffold_938_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7003..9510)
DNA (2508bp) protein (836aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34033.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_938_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9510..10355)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34034.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
multiple sugar transport system permease
L1_007_365G1_scaffold_938_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10352..11314)
DNA (963bp) protein (321aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWH7_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCY34035.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_938_11
unknown

Not on your lists

11360..11494
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_365G1_scaffold_938_12
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11478..12845)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43541.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_007_365G1_scaffold_938_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13007..13747
DNA (741bp) protein (247aa)
Transcriptional regulator AraC family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVK2_9FIRM
Transcriptional regulator AraC family protein {ECO:0000313|EMBL:CCY32149.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AraC family transcriptional regulator
L1_007_365G1_scaffold_938_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13922..16795)
DNA (2874bp) protein (958aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D087_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90190.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_365G1_scaffold_938_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16816..19233)
DNA (2418bp) protein (806aa)
chitobiose phosphorylase (EC:2.4.1.-)
Chitobiose phosphorylase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I571_9FIRM
Chitobiose phosphorylase {ECO:0000313|EMBL:CCY32152.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_365G1_scaffold_938_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19389..20081)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=3 Tax=Clostridiales RepID=D4LI02_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_938_17
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20138..20563)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Blautia RepID=D4LVT4_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L1_007_365G1_scaffold_938_18
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20632..21147)
DNA (516bp) protein (172aa)
Transcription termination/antitermination protein NusG n=1 Tax=Blautia sp. CAG:257 RepID=R5WYJ0_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
transcription antitermination protein nusG
L1_007_365G1_scaffold_938_19
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21164..21388)
DNA (225bp) protein (75aa)
Preprotein translocase SecE subunit n=1 Tax=Blautia sp. CAG:257 RepID=R5WP06_9FIRM
Preprotein translocase SecE subunit {ECO:0000313|EMBL:CDA05083.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
protein translocase subunit secE/sec61 gamma
L1_007_365G1_scaffold_938_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21786..22376)
DNA (591bp) protein (197aa)
Phosphopantetheinyl transferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHC3_9FIRM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CDD77614.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_938_21
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(22611..22913)
DNA (303bp) protein (101aa)
Anti-sigma factor antagonist n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XJF3_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L1_007_365G1_scaffold_938_22
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(23088..32078)
DNA (8991bp) protein (2997aa)
bacA; bacitracin synthase 1 (EC:5.1.1.3)
Surfactin synthetase B n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N9I3_9FIRM
Surfactin synthetase B {ECO:0000313|EMBL:CDF08777.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L1_007_365G1_scaffold_938_23
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(32091..33836)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N9M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08778.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Na+-driven multidrug efflux pump
L1_007_365G1_scaffold_938_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34140..35126)
DNA (987bp) protein (329aa)
Oligopeptide ABC transporter ATP-binding protein OppF n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5M5_9FIRM
Oligopeptide ABC transporter ATP-binding protein OppF {ECO:0000313|EMBL:CCY32312.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L1_007_365G1_scaffold_938_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35126..36094)
DNA (969bp) protein (323aa)
Dipeptide ABC transporter ATP-binding protein DppD n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I690_9FIRM
Dipeptide ABC transporter ATP-binding protein DppD {ECO:0000313|EMBL:CCY32311.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L1_007_365G1_scaffold_938_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36240..37820)
DNA (1581bp) protein (527aa)
Putative oligopeptide/dipeptide ABC transporter peptide-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRF1_9FIRM
Putative oligopeptide/dipeptide ABC transporter peptide-binding protein {ECO:0000313|EMBL:CCY32310.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter peptide-binding protein
L1_007_365G1_scaffold_938_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37964..38833)
DNA (870bp) protein (290aa)
Oligopeptide ABC transporter permease protein AppC n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVZ4_9FIRM
Oligopeptide ABC transporter permease protein AppC {ECO:0000313|EMBL:CCY32309.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
appC; Oligopeptide transport system permease protein AppC
L1_007_365G1_scaffold_938_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38853..39809)
DNA (957bp) protein (319aa)
Oligopeptide ABC transporter permease protein AppB n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRC3_9FIRM
Oligopeptide ABC transporter permease protein AppB {ECO:0000313|EMBL:CCY32308.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oligopeptide/dipeptide ABC transporter permease
L1_007_365G1_scaffold_938_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39907..41187)
DNA (1281bp) protein (427aa)
UPF0597 protein BN729_01377 n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5L9_9FIRM
UPF0597 protein BN729_01377 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_365G1_scaffold_938_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41379..42116)
DNA (738bp) protein (246aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I687_9FIRM
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:CCY32306.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Displaying 30 items

View Taxonomy