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L1_007_365G1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_38_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2..1312
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43762.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
PhoH family protein
L1_007_365G1_scaffold_38_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

1342..1998
DNA (657bp) protein (219aa)
HDIG domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REL9_9FIRM
HDIG domain protein {ECO:0000313|EMBL:CDC43764.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
HD domain.
L1_007_365G1_scaffold_38_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2151..3779
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R784_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43765.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
aminoglycoside phosphotransferase
L1_007_365G1_scaffold_38_4
unknown

Not on your lists

comp(3774..3923)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_365G1_scaffold_38_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

4385..5608
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAX0_9FIRM
L1_007_365G1_scaffold_38_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(5681..6223)
DNA (543bp) protein (181aa)
Carbonate dehydratase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R788_9FIRM
Carbonate dehydratase {ECO:0000313|EMBL:CDC43770.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbonic anhydrase
L1_007_365G1_scaffold_38_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

6516..7142
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43773.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_38_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

7330..8766
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Methylmalonyl-CoA decarboxylase alpha subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4C6_9FIRM
Methylmalonyl-CoA decarboxylase alpha subunit {ECO:0000313|EMBL:CDC43778.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_38_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

8783..9544
DNA (762bp) protein (254aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R799_9FIRM
sodium pump decarboxylases, gamma subunit
L1_007_365G1_scaffold_38_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

9569..9934
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43782.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit
L1_007_365G1_scaffold_38_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

10005..11153
DNA (1149bp) protein (383aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43784.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_38_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

11190..12605
DNA (1416bp) protein (472aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAY9_9FIRM
Oxaloacetate decarboxylase alpha subunit {ECO:0000313|EMBL:CDC43787.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_38_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

12859..13770
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43788.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Transcriptional regulators
L1_007_365G1_scaffold_38_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

13782..15026
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43789.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
conserved hypothetical protein TIGR00275
L1_007_365G1_scaffold_38_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

15049..15729
DNA (681bp) protein (227aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7B1_9FIRM
L1_007_365G1_scaffold_38_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

15732..16583
DNA (852bp) protein (284aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL53_9FIRM
L1_007_365G1_scaffold_38_17
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16564..17658
DNA (1095bp) protein (365aa)
S1 RNA binding domain protein n=3 Tax=Lachnospiraceae RepID=C9L674_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG82809.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Ribosomal protein S1
L1_007_365G1_scaffold_38_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(17681..18853)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43797.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_38_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

19031..20353
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4D9_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
rnfC/nqrF
L1_007_365G1_scaffold_38_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

20366..21325
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REQ1_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex, RnfABCDGE type, D subunit
L1_007_365G1_scaffold_38_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

21322..21930
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7C2_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L1_007_365G1_scaffold_38_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

21932..22636
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL66_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex, RnfABCDGE type, E subunit
L1_007_365G1_scaffold_38_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22650..23225
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SB04_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex, RnfABCDGE type, A subunit
L1_007_365G1_scaffold_38_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

23239..24027
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43803.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex protein RnfB
L1_007_365G1_scaffold_38_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24305..24679
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43804.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_38_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24689..25195
DNA (507bp) protein (169aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL73_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:CDC43806.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted membrane protein
L1_007_365G1_scaffold_38_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25209..25820
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4E7_9FIRM
Holliday junction DNA helicase subunit RuvA
L1_007_365G1_scaffold_38_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25842..26831
DNA (990bp) protein (330aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7D5_9FIRM
L1_007_365G1_scaffold_38_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

26901..27308
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL76_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cell division protein ZapA
L1_007_365G1_scaffold_38_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

27379..29571
DNA (2193bp) protein (731aa)
Protease n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4F3_9FIRM
Protease {ECO:0000313|EMBL:CDC43813.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
peptidase U32
Displaying items 1-30 of 191 in total

View Taxonomy