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L1_007_365G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_110_1
unknown

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206..316
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_365G1_scaffold_110_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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520..903
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44950.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transcriptional regulator, GntR family
L1_007_365G1_scaffold_110_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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893..1777
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7S0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC44948.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_110_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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1774..2433
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44945.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_110_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2449..3141
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SEB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44942.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_110_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3221..4876
DNA (1656bp) protein (552aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RPE0_9FIRM
L1_007_365G1_scaffold_110_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

4906..5742
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44940.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Cell Wall Hydrolase.
L1_007_365G1_scaffold_110_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

5759..7252
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44939.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
threonine synthase
L1_007_365G1_scaffold_110_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

7377..8981
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7R1_9FIRM
L1_007_365G1_scaffold_110_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

9389..10456
DNA (1068bp) protein (356aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RPD4_9FIRM
L1_007_365G1_scaffold_110_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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10575..11984
DNA (1410bp) protein (470aa)
Stage II sporulation-related protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAN5_9FIRM
Stage II sporulation-related protein {ECO:0000313|EMBL:CDC44935.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
SpoIID/LytB domain
L1_007_365G1_scaffold_110_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

12034..12963
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44934.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted membrane protein
L1_007_365G1_scaffold_110_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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13297..14331
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
pheS; phenylalanyl-tRNA synthetase alpha subunit PheS (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SEA7_9FIRM
L1_007_365G1_scaffold_110_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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14350..16770
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SEA2_9FIRM
phenylalanyl-tRNA synthetase subunit beta
L1_007_365G1_scaffold_110_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

16784..17389
DNA (606bp) protein (202aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHU4_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDC44924.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_110_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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17500..17793
DNA (294bp) protein (98aa)
Addiction module antitoxin RelB/DinJ family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAM3_9FIRM
Addiction module antitoxin RelB/DinJ family {ECO:0000313|EMBL:CDC44920.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
addiction module antitoxin, RelB/DinJ family
L1_007_365G1_scaffold_110_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

17783..18097
DNA (315bp) protein (105aa)
Plasmid stabilization system protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SE90_9FIRM
Plasmid stabilization system protein {ECO:0000313|EMBL:CDC44917.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Plasmid stabilisation system protein.
L1_007_365G1_scaffold_110_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

18369..19394
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAL8_9FIRM
L1_007_365G1_scaffold_110_19
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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19522..19887
DNA (366bp) protein (122aa)
HTH domain-containing protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RX00_BUTPB
hypothetical protein
HTH domain-containing protein {ECO:0000313|EMBL:ADL34908.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_007_365G1_scaffold_110_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

19891..20694
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44888.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_110_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

20698..21636
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44885.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_110_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

21651..22151
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SE49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44882.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_110_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22262..22726
DNA (465bp) protein (155aa)
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHP8_9FIRM
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein {ECO:0000313|EMBL:CDC44879.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
RNA polymerase sigma factor
L1_007_365G1_scaffold_110_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22743..23948
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SE42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44877.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_110_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23940..24671)
DNA (732bp) protein (244aa)
Predicted membrane protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAH8_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC44875.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_110_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24681..25412)
DNA (732bp) protein (244aa)
ABC superfamily ATP binding cassette transporter permease protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7J9_9FIRM
ABC superfamily ATP binding cassette transporter permease protein {ECO:0000313|EMBL:CDC44873.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter permease
L1_007_365G1_scaffold_110_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25405..26328)
DNA (924bp) protein (308aa)
Bacitracin ABC ATP binding cassette transporter ABC protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SE37_9FIRM
Bacitracin ABC ATP binding cassette transporter ABC protein {ECO:0000313|EMBL:CDC44872.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_110_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26427..27350)
DNA (924bp) protein (308aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RP66_9FIRM
two-component sensor histidine kinase
L1_007_365G1_scaffold_110_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(27353..28060)
DNA (708bp) protein (236aa)
Two-component response regulator n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAH2_9FIRM
Two-component response regulator {ECO:0000313|EMBL:CDC44870.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
two-component response regulator
L1_007_365G1_scaffold_110_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28133..28900)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44869.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted transcriptional regulators
Displaying items 1-30 of 142 in total

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