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L1_007_365G1_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_277_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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95..871
DNA (777bp) protein (259aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRN9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA81326.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_277_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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941..1594
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80966.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phospholipase
L1_007_365G1_scaffold_277_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1616..1933
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YII1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89993.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L1_007_365G1_scaffold_277_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(2353..3108)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43204.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_277_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3105..4193)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43206.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_277_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4206..5327)
DNA (1122bp) protein (374aa)
ABC-type Fe3+-hydroxamate transport system periplasmic component n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2V1_9FIRM
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:CDC43208.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_007_365G1_scaffold_277_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(5332..6288)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43209.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_277_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(7060..7371)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S996_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43212.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein conserved in bacteria (DUF2325).
L1_007_365G1_scaffold_277_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(7392..9389)
DNA (1998bp) protein (666aa)
Ferrous iron transporter B n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5J7_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:CDC43215.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ferrous iron transporter FeoB
L1_007_365G1_scaffold_277_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(9477..9695)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43217.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
FeoA domain.
L1_007_365G1_scaffold_277_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(9706..9885)
DNA (180bp) protein (60aa)
WAP four-disulfide core domain protein 5 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5K2_9FIRM
WAP four-disulfide core domain protein 5 {ECO:0000313|EMBL:CDC43220.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_277_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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10035..10412
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43224.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Mn-dependent transcriptional regulator
L1_007_365G1_scaffold_277_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(10538..11173)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43226.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_277_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11197..12654)
DNA (1458bp) protein (486aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9B1_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDC43227.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_277_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12647..13309)
DNA (663bp) protein (221aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD52_9FIRM
L1_007_365G1_scaffold_277_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(13281..14117)
DNA (837bp) protein (279aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJJ6_9FIRM
L1_007_365G1_scaffold_277_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14122..14610)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43234.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
thiW protein
L1_007_365G1_scaffold_277_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(14900..17524)
DNA (2625bp) protein (875aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5L7_9FIRM
Pyruvate {ECO:0000313|EMBL:CDC43235.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_277_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(17780..19042)
DNA (1263bp) protein (421aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9D2_9FIRM
L1_007_365G1_scaffold_277_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(19182..20486)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43238.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Bacterial capsule synthesis protein PGA_cap.
L1_007_365G1_scaffold_277_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(20617..21843)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43239.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_277_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(21864..22262)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43240.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_277_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(22363..24000)
DNA (1638bp) protein (546aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol-1-phosphate/altronate dehydrogenases n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJK6_9FIRM
Mannitol-1-phosphate/altronate dehydrogenases {ECO:0000313|EMBL:CDC43241.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_277_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists


comp(24082..25476)
DNA (1395bp) protein (465aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2X6_9FIRM
L1_007_365G1_scaffold_277_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25594..26925)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43244.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_277_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

27018..27845
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43245.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
MerR family transcriptional regulator
L1_007_365G1_scaffold_277_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(27851..28612)
DNA (762bp) protein (254aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJL1_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA replication and repair protein RecO
L1_007_365G1_scaffold_277_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(28609..29517)
DNA (909bp) protein (303aa)
GTPase Era n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9E0_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
GTP-binding protein Era
L1_007_365G1_scaffold_277_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(29540..32458)
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43248.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted Zn-dependent peptidases, insulinase-like
L1_007_365G1_scaffold_277_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

32800..34140
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43249.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hemolysin
Displaying items 1-30 of 77 in total

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