ggKbase home page

L1_007_365G1_scaffold_890

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_890_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(96..584)
DNA (489bp) protein (163aa)
Transcriptional activator TipA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAS7_9FIRM
Transcriptional activator TipA {ECO:0000313|EMBL:CDC46003.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
mta; HTH-type transcriptional activator mta
L1_007_365G1_scaffold_890_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

1148..1828
DNA (681bp) protein (227aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSG8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC46001.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_890_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

1828..4509
DNA (2682bp) protein (894aa)
Efflux ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL38_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC45999.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter permease
L1_007_365G1_scaffold_890_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(4478..5668)
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Sensor protein ResE n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SHB9_9FIRM
two-component sensor histidine kinase
L1_007_365G1_scaffold_890_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(5661..6335)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45994.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
two-component response regulator
L1_007_365G1_scaffold_890_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(6338..8998)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SH96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45992.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
helicase
L1_007_365G1_scaffold_890_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9043..9828)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45986.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_890_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9938..11131)
DNA (1194bp) protein (398aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDQ5_9FIRM
signal transduction histidine kinase
L1_007_365G1_scaffold_890_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11073..11768)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45984.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_890_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11786..12613)
DNA (828bp) protein (276aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
Dihydroneopterin aldolase FolB / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase FolK multi-domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAN7_9FIRM
Dihydroneopterin aldolase FolB / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase FolK multi-domain protein {ECO:0000313|EMBL:CDC45983.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12610..13428)
DNA (819bp) protein (273aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SH88_9FIRM
L1_007_365G1_scaffold_890_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13441..13923)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45981.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
HDIG domain-containing protein
L1_007_365G1_scaffold_890_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13925..14485)
DNA (561bp) protein (187aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDQ1_9FIRM
L1_007_365G1_scaffold_890_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14478..15776)
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45978.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(15883..16587)
DNA (705bp) protein (235aa)
Protein involved in cell division n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAM9_9FIRM
Protein involved in cell division {ECO:0000313|EMBL:CDC45973.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Protein involved in cell division
L1_007_365G1_scaffold_890_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16620..17273)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45971.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_890_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(17270..18121)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45970.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_890_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18115..18495)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45969.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_890_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

18767..19078
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45968.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_365G1_scaffold_890_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

19085..20125
DNA (1041bp) protein (347aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SH73_9FIRM
ATP synthase subunit {ECO:0000313|EMBL:CDC45967.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

20143..22095
DNA (1953bp) protein (651aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSA9_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22108..22545
DNA (438bp) protein (146aa)
ATP synthase subunit C. (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45965.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22568..22876
DNA (309bp) protein (103aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKX4_9FIRM
ATP synthase subunit {ECO:0000313|EMBL:CDC45964.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22893..23480
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45963.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L1_007_365G1_scaffold_890_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

23473..25239
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SH67_9FIRM
L1_007_365G1_scaffold_890_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25254..26639
DNA (1386bp) protein (462aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSA3_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

26751..27284
DNA (534bp) protein (178aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D 1 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDN0_9FIRM
V-type ATP synthase subunit D 1 {ECO:0000313|EMBL:CDC45960.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(27403..28059)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45959.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_365G1_scaffold_890_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28056..28916)
DNA (861bp) protein (287aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAL6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC45958.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_890_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28942..29313)
DNA (372bp) protein (124aa)
GntR family Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SH61_9FIRM
GntR family Transcriptional regulator {ECO:0000313|EMBL:CDC45957.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
GntR family transcriptional regulator
Displaying items 1-30 of 33 in total

View Taxonomy