ggKbase home page

L1_008_000G1_scaffold_2006

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2006_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1M8_BIFBR
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
L1_008_000G1_scaffold_2006_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(615..788)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBX6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88004.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_000G1_scaffold_2006_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

918..1880
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6X5_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27977.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_2006_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1956..3002)
DNA (1047bp) protein (349aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BM73_BIFBR
Permease protein of ABC transporter system
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ99269.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE89892.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_2006_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2999..3937)
DNA (939bp) protein (313aa)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0Z5_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20499.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_2006_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4138..5076)
DNA (939bp) protein (313aa)
RNA methyltransferase, TrmH family n=2 Tax=Bifidobacterium breve RepID=D4BM72_BIFBR
23S rRNA methyltransferase
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFE89891.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99268.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_2006_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5165..5794)
DNA (630bp) protein (210aa)
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:ABE94977.1}; EC=2.4.2.10 {ECO:0000313|EMBL:ABE94977.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Orotate phosphoribosyltransferase n=3 Tax=Bifidobacterium breve RepID=F9Y0Z3_BIFBU
Orotate phosphoribosyltransferase
L1_008_000G1_scaffold_2006_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5791..7218)
DNA (1428bp) protein (476aa)
RmuC domain protein n=3 Tax=Bifidobacterium breve RepID=D4BM70_BIFBR
RmuC-like DNA recombination protein
RmuC domain protein {ECO:0000313|EMBL:EFE89889.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99266.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_2006_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7345..7626)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0Z1_BIFBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20495.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_2006_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7736..10297
DNA (2562bp) protein (854aa)
HAD ATPase, P-type, family IC n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJJ1_BIFBR
Copper-transporting ATPase
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EPD76546.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_2006_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10376..11107)
DNA (732bp) protein (244aa)
Glycerol uptake facilitator protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYP9_BIFBR
Glycerol uptake facilitator protein
MIP family channel protein {ECO:0000313|EMBL:EPD76545.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_2006_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11623..12069)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=3 Tax=Bifidobacterium breve RepID=F6C6V5_BIFBA
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_2006_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12089..12337)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=5 Tax=Bifidobacterium breve RepID=F6C6V4_BIFBA
SSU ribosomal protein S18P
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_2006_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12395..13039)
DNA (645bp) protein (215aa)
Single-stranded DNA-binding protein n=4 Tax=Bifidobacterium breve RepID=F9Y0X7_BIFBU
Single-strand DNA binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_2006_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13088..13354)
DNA (267bp) protein (89aa)
30S ribosomal protein S6 n=26 Tax=Bifidobacterium RepID=RS6_BIFLO
rpsF; SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000G1_scaffold_2006_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13468..14313
DNA (846bp) protein (282aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EFE89860.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EFE89860.1};; Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:BAQ99244.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Ribose-phosphate diphosphokinase n=4 Tax=Bifidobacterium breve RepID=F6C6M8_BIFBA
Ribose-phosphate pyrophosphokinase
L1_008_000G1_scaffold_2006_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14310..14435
DNA (126bp) protein (42aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KEY23540.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KEY23540.1};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTS1_BIFLS
ribose-phosphate pyrophosphokinase
L1_008_000G1_scaffold_2006_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14510..14617)
DNA (108bp) protein (36aa)
Alanine racemase domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTS0_BIFLS
pyridoxal phosphate enzyme, YggS family
Uncharacterized protein {ECO:0000313|EMBL:KEY31825.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Displaying 18 items

View Taxonomy