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L1_008_000G1_scaffold_2153

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2153_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(164..1798)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I9TWE9_BACVU
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74056.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1913..3583)
DNA (1671bp) protein (557aa)
TrkA C-terminal domain protein n=7 Tax=root RepID=C6ZAC0_9BACE
hypothetical protein
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EIY74055.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3869..5779
DNA (1911bp) protein (637aa)
Methylmalonyl-CoA mutase, small subunit n=6 Tax=root RepID=C6ZAB9_9BACE
methylmalonyl-CoA mutase small subunit
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:EOS00087.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_2153_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5789..7939
DNA (2151bp) protein (717aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EFG16611.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EFG16611.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Methylmalonyl-CoA mutase large subunit n=5 Tax=Bacteroides RepID=A6KX66_BACV8
L1_008_000G1_scaffold_2153_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8287..8814)
DNA (528bp) protein (176aa)
Outer membrane protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZ96_9BACE
Outer membrane protein {ECO:0000313|EMBL:CDF17442.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
starch-binding protein
L1_008_000G1_scaffold_2153_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8799..9380)
DNA (582bp) protein (194aa)
Outer membrane protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZ96_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74052.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9385..9513)
DNA (129bp) protein (43aa)
Outer membrane protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZ96_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS00089.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_2153_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9527..12745)
DNA (3219bp) protein (1073aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C6ZAB6_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV66933.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
collagen-binding protein
L1_008_000G1_scaffold_2153_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13149..13502)
DNA (354bp) protein (118aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZEX5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00091.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_000G1_scaffold_2153_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13647..15956)
DNA (2310bp) protein (770aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KX70_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38034.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_2153_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16127..17623
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroides RepID=C6ZAB3_9BACE
two-component system sensor histidine kinase
L1_008_000G1_scaffold_2153_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17742..18935)
DNA (1194bp) protein (398aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family protein n=3 Tax=Bacteroides vulgatus RepID=D4VBJ4_BACVU
membrane transport protein
Putative membrane transport protein {ECO:0000313|EMBL:ABR38036.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_2153_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19052..22168)
DNA (3117bp) protein (1039aa)
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein n=5 Tax=root RepID=D4VBJ3_BACVU
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY74045.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
cation efflux pump
L1_008_000G1_scaffold_2153_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22173..23303)
DNA (1131bp) protein (377aa)
Cation efflux pump n=6 Tax=Bacteroides RepID=E5UVB9_9BACE
cation efflux pump
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY74044.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23358..24755)
DNA (1398bp) protein (466aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Bacteroides vulgatus RepID=D4VBJ1_BACVU
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:KDS26270.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
outer membrane efflux protein oprM
L1_008_000G1_scaffold_2153_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24887..25429)
DNA (543bp) protein (181aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX76_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS00098.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_2153_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25557..26378)
DNA (822bp) protein (274aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Signal peptidase I n=3 Tax=Bacteroides RepID=D4VBI8_BACVU
signal peptidase I
L1_008_000G1_scaffold_2153_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26375..26953)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFZ9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00100.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_000G1_scaffold_2153_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26950..28014)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX79_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38043.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_000G1_scaffold_2153_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28093..28353)
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KX80_BACV8
hypothetical protein
NVEALA family protein {ECO:0000313|EMBL:KDS54873.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_000G1_scaffold_2153_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28746..29573
DNA (828bp) protein (276aa)
Electron transfer flavoprotein beta-subunit n=8 Tax=Bacteroides RepID=A6KX81_BACV8
electron transfer flavoprotein subunit beta
Electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:EFV66920.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_000G1_scaffold_2153_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29579..30598
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha-subunit n=7 Tax=Bacteroides RepID=A6KX82_BACV8
electron transfer flavoprotein subunit alpha
Uncharacterized protein {ECO:0000313|EMBL:EIY74036.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30634..31014
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6KX83_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74035.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31056..32762
DNA (1707bp) protein (569aa)
Acyl-CoA dehydrogenase n=7 Tax=Bacteroides RepID=A6KX84_BACV8
acyl-CoA dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EIY74034.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33221..33829
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=root RepID=C6ZA99_9BACE
histidine decarboxylase
Histidine decarboxylase {ECO:0000313|EMBL:EFV66916.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_000G1_scaffold_2153_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33909..34319)
DNA (411bp) protein (137aa)
Phenylacetic acid degradation protein n=8 Tax=root RepID=E5UVA7_9BACE
phenylacetic acid degradation protein
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EIY74032.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_000G1_scaffold_2153_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34347..35435)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6ZA97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY74031.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA mismatch repair protein
L1_008_000G1_scaffold_2153_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35500..36717
DNA (1218bp) protein (406aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5Q9_BACVU
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L1_008_000G1_scaffold_2153_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37179..39089
DNA (1911bp) protein (637aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=3 Tax=Bacteroides RepID=C6ZA95_9BACE
L1_008_000G1_scaffold_2153_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39172..40074
DNA (903bp) protein (301aa)
Glutamate formiminotransferase n=2 Tax=Bacteroides RepID=I8ZGA9_BACVU
Glutamate formiminotransferase {ECO:0000313|EMBL:CDF17254.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
formiminotransferase-cyclodeaminase
Displaying items 1-30 of 54 in total

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