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L1_008_000G1_scaffold_2560

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2560_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..398)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P405_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33167.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_008_000G1_scaffold_2560_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(501..2015)
DNA (1515bp) protein (505aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L1_008_000G1_scaffold_2560_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2462..3442
DNA (981bp) protein (327aa)
Transcriptional regulator, FucR n=4 Tax=Bacteroides RepID=A6L049_BACV8
transcriptional regulator, FucR
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EET13919.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_000G1_scaffold_2560_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3464..6433
DNA (2970bp) protein (990aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
L1_008_000G1_scaffold_2560_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6576..7181)
DNA (606bp) protein (202aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribonuclease HII n=8 Tax=root RepID=RNH2_BACV8
L1_008_000G1_scaffold_2560_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7283..8908
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HF11_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02504.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_000G1_scaffold_2560_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9132..12260
DNA (3129bp) protein (1043aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEL6_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS02503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_000G1_scaffold_2560_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12281..13798
DNA (1518bp) protein (506aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8WEH1_9BACE
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF19080.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
starch-binding protein
L1_008_000G1_scaffold_2560_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13913..14194
DNA (282bp) protein (94aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6L042_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_000G1_scaffold_2560_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14191..14793
DNA (603bp) protein (201aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q3T2_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56844.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_000G1_scaffold_2560_11
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14807..16177
DNA (1371bp) protein (457aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E0E1_9BACE
glycoside hydrolase
L1_008_000G1_scaffold_2560_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16141..17766
DNA (1626bp) protein (542aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Beta-galactosidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HF07_BACVU
glycoside hydrolase
L1_008_000G1_scaffold_2560_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17784..17867
DNA (84bp) protein (28aa)
Alpha alpha-trehalase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3H1_9BACE
glycoside hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EOS02498.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 13 items

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