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L1_008_000G1_scaffold_1431

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1431_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..574
DNA (573bp) protein (191aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=10 Tax=Bifidobacterium longum RepID=D6DB27_BIFLN
malK; malk
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ72092.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_008_000G1_scaffold_1431_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

811..2208
DNA (1398bp) protein (466aa)
Lipopolysaccharide kinase n=3 Tax=Bifidobacterium longum RepID=B3DP58_BIFLD
lipopolysaccharide kinase
Lipopolysaccharide kinase {ECO:0000313|EMBL:KEY33245.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_000G1_scaffold_1431_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2315..3307)
DNA (993bp) protein (331aa)
rRNA methylase n=17 Tax=Bifidobacterium RepID=B3DP59_BIFLD
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:KEY24089.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000G1_scaffold_1431_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3405..4505
DNA (1101bp) protein (367aa)
Transport protein n=5 Tax=Bifidobacterium RepID=E8MFT2_BIFL2
transport protein
Transport protein {ECO:0000313|EMBL:BAJ67559.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000G1_scaffold_1431_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4584..5414
DNA (831bp) protein (277aa)
Esterase/lipase n=8 Tax=Bifidobacterium RepID=B3DP61_BIFLD
xylan esterase
Acetyl esterase {ECO:0000313|EMBL:KEY24091.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000G1_scaffold_1431_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5871..8489
DNA (2619bp) protein (873aa)
Cation-transporting ATPase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWD8_BIFL1
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEI80351.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
pacL1; cation-transporting ATPase PacL
L1_008_000G1_scaffold_1431_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8725..10446)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWS0_BIFLN
Sugar-binding domain protein {ECO:0000313|EMBL:EIJ26384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_008_000G1_scaffold_1431_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10509..11090)
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:CBK71390.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Deoxycytidine triphosphate deaminase n=18 Tax=Bifidobacterium RepID=DCD_BIFLD
deoxycytidine triphosphate deaminase
L1_008_000G1_scaffold_1431_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11448..12308
DNA (861bp) protein (287aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C5E9R8_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32431.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_000G1_scaffold_1431_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12427..13185
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=2 Tax=Bifidobacterium longum RepID=E8MWD4_BIFL1
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:BAJ72078.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_008_000G1_scaffold_1431_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13379..15451)
DNA (2073bp) protein (691aa)
Na+/H+ antiporter, NhaP n=1 Tax=Bifidobacterium longum E18 RepID=V6Y0Z5_BIFLN
Na+/H+ antiporter, NhaP {ECO:0000313|EMBL:ESV34456.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Na+/H+ antiporter
L1_008_000G1_scaffold_1431_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15548..16024
DNA (477bp) protein (159aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
CMP/dCMP deaminase, zinc-binding n=2 Tax=Bifidobacterium longum RepID=B7GPC0_BIFLS
zinc-binding CMP/dCMP deaminase
L1_008_000G1_scaffold_1431_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16144..18450
DNA (2307bp) protein (769aa)
Alpha-galactosidase n=5 Tax=Bifidobacterium longum RepID=G8K028_BIFLO
alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:KEY33234.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_000G1_scaffold_1431_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18615..19823)
DNA (1209bp) protein (403aa)
ROK family protein n=8 Tax=Bacteria RepID=V6XZ41_BIFLN
NagC family transcriptional regulator {ECO:0000313|EMBL:KHD95522.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
NagC/XylR-type transcriptional regulator
L1_008_000G1_scaffold_1431_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19997..21388
DNA (1392bp) protein (464aa)
Sugar ABC transporter substrate binding component n=9 Tax=Bacteria RepID=E8MFS0_BIFL2
sugar ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY33232.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_000G1_scaffold_1431_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21328..22155
DNA (828bp) protein (276aa)
Sugar ABC transporter permease component n=8 Tax=Bifidobacterium RepID=E8MFR9_BIFL2
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AIW43053.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_000G1_scaffold_1431_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22174..23040
DNA (867bp) protein (289aa)
MalG-type ABC sugar transport system permease component n=18 Tax=Bifidobacterium RepID=B3DP73_BIFLD
sugar ABC transporter permease
MalG-type ABC sugar transport system permease component {ECO:0000313|EMBL:ACD98932.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000G1_scaffold_1431_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23099..24118)
DNA (1020bp) protein (340aa)
LacI-type response repressor n=2 Tax=Bifidobacterium longum RepID=B3DP74_BIFLD
LacI family response repressor
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY24105.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000G1_scaffold_1431_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24236..25264)
DNA (1029bp) protein (343aa)
Transcriptional regulator n=5 Tax=Bifidobacterium longum RepID=F8APT0_BIFLN
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAJ67543.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000G1_scaffold_1431_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25472..26800
DNA (1329bp) protein (443aa)
MalE-type ABC sugar transport system periplasmic component n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APT1_BIFLN
MalE-type ABC sugar transport system periplasmic component
MalE-type ABC sugar transport system periplasmic component {ECO:0000313|EMBL:AEI98531.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_000G1_scaffold_1431_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26861..27979
DNA (1119bp) protein (373aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=V6Y0Y7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV34446.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_008_000G1_scaffold_1431_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27972..28127)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATA6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ23263.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000G1_scaffold_1431_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28226..29551
DNA (1326bp) protein (442aa)
MalE-type ABC sugar transport system periplasmic component n=9 Tax=Bifidobacterium longum RepID=B3DP78_BIFLD
ABC transporter substrate-binding protein
Putative ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ67540.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000G1_scaffold_1431_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29555..30595
DNA (1041bp) protein (347aa)
Permease protein of ABC transporter system for sugars n=11 Tax=Bifidobacterium RepID=F9XZU1_BIFBU
Permease protein of ABC transporter system for sugars
Permease protein of ABC transporter system for sugars {ECO:0000313|EMBL:BAP84486.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_000G1_scaffold_1431_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30598..31422
DNA (825bp) protein (275aa)
MalG-type ABC sugar transport system permease component n=12 Tax=Bifidobacterium RepID=B3DP80_BIFLD
Permease protein of ABC transporter system for sugars
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ67538.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000G1_scaffold_1431_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31523..33193
DNA (1671bp) protein (557aa)
Glycosidase n=9 Tax=Bifidobacterium longum RepID=B3DP81_BIFLD
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:BAJ67537.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000G1_scaffold_1431_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33225..35087
DNA (1863bp) protein (621aa)
Alpha-galactosidase n=9 Tax=Bifidobacterium longum RepID=D6DB51_BIFLN
raffinose synthase
Raffinose synthase or seed inhibition protein Sip1 domain protein {ECO:0000313|EMBL:EIJ23252.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000G1_scaffold_1431_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35211..37031
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:EIJ23265.1}; EC=3.2.1.10 {ECO:0000313|EMBL:EIJ23265.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Alpha amylase, catalytic region n=8 Tax=Bifidobacterium longum RepID=D6ZWZ9_BIFLJ
alpha amylase catalytic subunit
L1_008_000G1_scaffold_1431_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37279..38544
DNA (1266bp) protein (422aa)
Threonine dehydratase {ECO:0000313|EMBL:KEY33228.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KEY33228.1};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Threonine dehydratase n=14 Tax=Bifidobacterium RepID=B3DP84_BIFLD
ilvA; ilva
L1_008_000G1_scaffold_1431_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38690..39445)
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase n=13 Tax=Bifidobacterium RepID=B3DP85_BIFLD
nad-dependent protein deacetylase
Transcriptional regulator {ECO:0000313|EMBL:AEI98541.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying 30 items

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