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L1_008_000G1_scaffold_1673

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1673_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIN1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76236.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
alpha-glucosidase
L1_008_000G1_scaffold_1673_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1003..1869)
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bifidobacterium RepID=B7GPB5_BIFLS
sugar ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AEF27105.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_000G1_scaffold_1673_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1888..2838)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Bifidobacterium RepID=B7GPB6_BIFLS
Raffinose transport system permease protein
Raffinose transport system permease protein {ECO:0000313|EMBL:AHJ22041.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_1673_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2816..4048)
DNA (1233bp) protein (411aa)
Raffinose-binding protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZU9_BIFBU
Raffinose-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI87803.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_000G1_scaffold_1673_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4221..5429
DNA (1209bp) protein (403aa)
ROK family protein n=5 Tax=Bifidobacterium breve RepID=F6C8V6_BIFBA
Transcriptional repressor, ROK family
Transcriptional repressor, ROK family {ECO:0000313|EMBL:ABE96530.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_000G1_scaffold_1673_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5542..7857)
DNA (2316bp) protein (772aa)
aga; Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIN5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76241.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_1673_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7974..8408)
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=3 Tax=Bifidobacterium breve RepID=F6C8V8_BIFBA
tRNA-specific adenosine deaminase
L1_008_000G1_scaffold_1673_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8859..10931
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=5 Tax=Bifidobacterium breve RepID=H3L261_BIFBR
putative Na+/H+ antiporter
Putative Na+/H+ antiporter {ECO:0000313|EMBL:EFE90071.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_1673_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10973..11776)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BL84_BIFBR
Hypothetical membrane spanning protein with DUF81 domain
Uncharacterized protein {ECO:0000313|EMBL:EFE90072.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_1673_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11888..12646)
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BL85_BIFBR
Phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:AHJ20219.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_000G1_scaffold_1673_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12704..13573)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0002D9C0C6
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ22049.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_1673_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13930..14511
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Deoxycytidine triphosphate deaminase n=3 Tax=Bifidobacterium breve RepID=F6C8W3_BIFBA
Deoxycytidine triphosphate deaminase
L1_008_000G1_scaffold_1673_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14976..15953
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CBF1_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ22051.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_1673_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16041..18752)
DNA (2712bp) protein (904aa)
pacL2; Calcium-transporting ATPase (EC:3.6.3.8)
Cation-transporting ATPase PacL n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L268_BIFBR
Potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EPD76249.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_1673_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19100..19315
DNA (216bp) protein (72aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=F6C8W6_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE90079.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_000G1_scaffold_1673_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19308..19820)
DNA (513bp) protein (171aa)
PTS system, glucose-specific IIABC component n=5 Tax=Bifidobacterium breve RepID=F9XZW0_BIFBU
PTS system, glucose-specific IIABC component
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EPD76251.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_1673_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19930..21468)
DNA (1539bp) protein (513aa)
PTS system N-acetylglucosamine-specific IIBC components n=5 Tax=Bifidobacterium RepID=B7GPD0_BIFLS
PTS system, N-acetylglucosamine-specific IIBC component
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EPD76252.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_000G1_scaffold_1673_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21770..22921)
DNA (1152bp) protein (384aa)
Transporter, major facilitator family protein n=4 Tax=Bifidobacterium breve RepID=F6C8W7_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:AHJ22055.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_000G1_scaffold_1673_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23026..23883
DNA (858bp) protein (286aa)
RNA methyltransferase, TrmH family, group 3 n=5 Tax=Bifidobacterium breve RepID=F6C8W8_BIFBA
SpoU rRNA methylase family protein
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ERI87821.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_000G1_scaffold_1673_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23935..24795)
DNA (861bp) protein (287aa)
Aldose 1-epimerase n=4 Tax=Bifidobacterium RepID=F6C8W9_BIFBA
Aldose 1-epimerase family protein
Aldose 1-epimerase {ECO:0000313|EMBL:CCY96294.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_000G1_scaffold_1673_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24850..26361)
DNA (1512bp) protein (504aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIP5_BIFBR
Galactose-1-phosphate uridylyltransferase
L1_008_000G1_scaffold_1673_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26539..27936)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C8X1_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96547.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_000G1_scaffold_1673_23
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28087..28272)
DNA (186bp) protein (62aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0I6_BIFBP
integrase, catalytic region
Integrase catalytic region {ECO:0000313|EMBL:CDB22344.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000G1_scaffold_1673_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28493..29065)
DNA (573bp) protein (191aa)
ABC transporter, ATP-binding protein n=6 Tax=Bifidobacterium breve RepID=F6C8Y1_BIFBA
ATP-binding protein of ABC transporter system for sugars
ATP-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:ABE96552.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying 24 items

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