ggKbase home page

L1_008_000G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 520 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_0_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(123..1307)
DNA (1185bp) protein (395aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RWH2_9LACO
amino acid aminotransferase
Amino acid aminotransferase {ECO:0000313|EMBL:AJC08050.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1390..1845
DNA (456bp) protein (152aa)
methionine sulfoxide reductase B (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Methionine-R-sulfoxide reductase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T6_9LACO
L1_008_000G1_scaffold_0_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1849..2610
DNA (762bp) protein (254aa)
Lysophospholipase L1 related esterase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S6T5_9LACO
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:AJC08048.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2708..3313
DNA (606bp) protein (202aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T4_9LACO
methionine sulfoxide reductase A
L1_008_000G1_scaffold_0_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3409..4287
DNA (879bp) protein (293aa)
Uncharacterized protein n=8 Tax=Lactobacillus gasseri RepID=C4VS63_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08045.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4359..5201)
DNA (843bp) protein (281aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1RWG7_9LACO
hypothetical protein
L1_008_000G1_scaffold_0_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5353..5529
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=13 Tax=Lactobacillus RepID=RS21_LACJO
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L1_008_000G1_scaffold_0_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5633..6076
DNA (444bp) protein (148aa)
YqeY-like protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T0_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC08042.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6107..7066
DNA (960bp) protein (320aa)
PhoH family protein n=2 Tax=Lactobacillus gasseri RepID=D7V3S9_9LACO
phosphate starvation-inducible protein PhoH
Phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:AJC08041.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7070..7597
DNA (528bp) protein (176aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Endoribonuclease YbeY n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3S8_9LACO
rRNA maturation factor
L1_008_000G1_scaffold_0_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7621..8532
DNA (912bp) protein (304aa)
GTPase Era n=4 Tax=Lactobacillus gasseri RepID=Q042Y2_LACGA
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8533..9285
DNA (753bp) protein (251aa)
DNA repair protein RecO n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3S6_9LACO
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9580..10497
DNA (918bp) protein (306aa)
glyQ; glycyl-tRNA synthase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Glycine--tRNA ligase alpha subunit n=2 Tax=Lactobacillus gasseri RepID=D7V3S5_9LACO
L1_008_000G1_scaffold_0_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10490..12562
DNA (2073bp) protein (691aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
Glycine--tRNA ligase beta subunit n=2 Tax=Lactobacillus gasseri RepID=D7V3S4_9LACO
glyS; glycyl-tRNA synthetase subunit beta
L1_008_000G1_scaffold_0_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12586..14400
DNA (1815bp) protein (605aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
DNA primase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQA2_9LACO
DNA primase
L1_008_000G1_scaffold_0_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14416..15537
DNA (1122bp) protein (374aa)
RNA polymerase sigma factor SigA n=8 Tax=Lactobacillus gasseri RepID=Q042Y7_LACGA
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_17
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15711..16370
DNA (660bp) protein (220aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Lactobacillus gasseri K7 RepID=S1SL33_9LACO
ABC transporter permease
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:AHA97267.1}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
L1_008_000G1_scaffold_0_18
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16351..17028
DNA (678bp) protein (226aa)
ABC transporter permease component n=4 Tax=Lactobacillus johnsonii RepID=F4ACF3_LACJH
ABC transporter permease
ABC transporter permease component {ECO:0000313|EMBL:EGP12273.1}; TaxID=1037411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii pf01.;"
L1_008_000G1_scaffold_0_19
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17032..17772
DNA (741bp) protein (247aa)
ABC transporter ATPase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZ02_9LACO
glutamine ABC transporter ATP-binding protein
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHA97269.1}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
L1_008_000G1_scaffold_0_20
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17784..18635
DNA (852bp) protein (284aa)
ABC transporter solute-binding component n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQ97_9LACO
amino acid ABC transporter substrate-binding protein
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHA97270.1}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
L1_008_000G1_scaffold_0_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18720..19433
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3S1_9LACO
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJC08033.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19430..20227
DNA (798bp) protein (266aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3S0_9LACO
hypothetical protein
L1_008_000G1_scaffold_0_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20239..21486
DNA (1248bp) protein (416aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Peptidase T n=1 Tax=Lactobacillus gasseri K7 RepID=S1S6R0_9LACO
peptidase T
L1_008_000G1_scaffold_0_24
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21799..22167
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=4 Tax=Lactobacillus RepID=F4ACF9_LACJH
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEB93210.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L1_008_000G1_scaffold_0_25
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22169..22876
DNA (708bp) protein (236aa)
ABC transporter, ATP-binding protein n=2 Tax=Lactobacillus gasseri RepID=D7V3R7_9LACO
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC08029.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_26
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22879..23697
DNA (819bp) protein (273aa)
ABC transporter permease n=1 Tax=Lactobacillus gasseri K7 RepID=S1RWF0_9LACO
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJC08028.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_27
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23707..24543
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3R5_9LACO
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJC08027.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L1_008_000G1_scaffold_0_28
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24615..24800)
DNA (186bp) protein (62aa)
Uncharacterized protein n=8 Tax=Lactobacillus gasseri RepID=E3RA14_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFL97698.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L1_008_000G1_scaffold_0_29
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24830..25402)
DNA (573bp) protein (191aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Signal peptidase I n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3R3_9LACO
signal peptidase
L1_008_000G1_scaffold_0_30
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25493..26221
DNA (729bp) protein (243aa)
SAM-dependent methyltransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQ87_9LACO
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJC08024.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Displaying items 1-30 of 520 in total

View Taxonomy