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L1_008_000G1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 396 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_1_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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205..1230
DNA (1026bp) protein (342aa)
Iron ABC transporter, periplasmic iron-binding protein n=3 Tax=Pseudomonas RepID=I2BUP1_PSEFL
fbpA; iron ABC transporter periplasmic iron-binding protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1230..2783
DNA (1554bp) protein (518aa)
Iron ABC transporter, permease protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BM05_PSEFL
fbpB; iron ABC transporter permease
FbpB protein {ECO:0000313|EMBL:AFJ55288.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2891..4825)
DNA (1935bp) protein (645aa)
Methyl-accepting chemotaxis protein n=2 Tax=Pseudomonas RepID=I2BKD3_PSEFL
methyl-accepting chemotaxis protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54716.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4965..6254)
DNA (1290bp) protein (430aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J573_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7496)
DNA (1188bp) protein (396aa)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Pseudomonas RepID=I4KAQ1_PSEFL
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
L1_008_000G1_scaffold_1_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7790..8656)
DNA (867bp) protein (289aa)
Protein HflC n=5 Tax=Pseudomonas RepID=I2BZN6_PSEFL
hflC; HflC protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8656..9831)
DNA (1176bp) protein (392aa)
HflK protein n=3 Tax=Pseudomonas RepID=I2BY43_PSEFL
hflK; HflK protein
HflK protein {ECO:0000313|EMBL:EIK63321.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_1_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9928..11229)
DNA (1302bp) protein (434aa)
GTPase HflX n=5 Tax=Pseudomonas RepID=I2BW23_PSEFL
hflX; GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_1_9
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11242..11502)
DNA (261bp) protein (87aa)
RNA-binding protein Hfq n=5 Tax=Pseudomonas RepID=I2BUV8_PSEFL
RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
L1_008_000G1_scaffold_1_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11597..12568)
DNA (972bp) protein (324aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=3 Tax=Pseudomonas RepID=I2BY19_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12568..14484)
DNA (1917bp) protein (639aa)
DNA mismatch repair protein MutL n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K2C4_PSEFL
mutL; DNA mismatch repair protein MutL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14484..15905)
DNA (1422bp) protein (474aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein {ECO:0000313|EMBL:AFJ57071.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AFJ57071.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
N-acetylmuramoyl-L-alanine amidase n=4 Tax=Pseudomonas RepID=I2BS38_PSEFL
L1_008_000G1_scaffold_1_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15921..16391)
DNA (471bp) protein (157aa)
ATPase, YjeE family n=3 Tax=Pseudomonas RepID=I2BLK8_PSEFL
YjeE family ATPase
Uncharacterized protein {ECO:0000313|EMBL:AFJ55141.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16379..17239)
DNA (861bp) protein (287aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J584_9PSED
YjeF family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17303..18367
DNA (1065bp) protein (355aa)
Epoxyqueuosine reductase n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KA21_PSEFL
iron-sulfur cluster-binding protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18364..18978)
DNA (615bp) protein (205aa)
Membrane protein, UPF0126 family n=3 Tax=Pseudomonas RepID=I2BWM5_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19164..19706)
DNA (543bp) protein (181aa)
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease n=5 Tax=Pseudomonas RepID=C3KDV5_PSEFS
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19815..20846
DNA (1032bp) protein (344aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Pseudomonas RepID=I2BVJ9_PSEFL
rsgA; ribosome small subunit-dependent GTPase A
L1_008_000G1_scaffold_1_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21169..21528
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BW44_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21587..22606)
DNA (1020bp) protein (340aa)
Chemotaxis protein MotB n=3 Tax=Pseudomonas RepID=I2BWQ4_PSEFL
motB; chemotaxis protein MotB
MotB protein {ECO:0000313|EMBL:AFJ58687.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22610..23461)
DNA (852bp) protein (284aa)
Chemotaxis protein MotA n=2 Tax=Pseudomonas RepID=I4K7N6_PSEFL
Chemotaxis protein MotA {ECO:0000313|EMBL:EIK60726.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
motA; chemotaxis protein MotA
L1_008_000G1_scaffold_1_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23628..25163
DNA (1536bp) protein (512aa)
HDOD domain protein n=2 Tax=Pseudomonas RepID=I2BY88_PSEFL
HDOD domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59221.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25221..26036
DNA (816bp) protein (272aa)
rhdA; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=2 Tax=Pseudomonas RepID=I2BZU5_PSEFL
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26052..26912
DNA (861bp) protein (287aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Pseudomonas sp. CF150 RepID=S6J590_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27047..28261)
DNA (1215bp) protein (405aa)
serB; phosphoserine phosphatase (EC:3.1.3.3)
SerB protein {ECO:0000313|EMBL:AFJ57660.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AFJ57660.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Phosphoserine phosphatase n=4 Tax=Pseudomonas RepID=I2BTS7_PSEFL
L1_008_000G1_scaffold_1_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28395..29927
DNA (1533bp) protein (511aa)
HAMP domain protein n=2 Tax=Pseudomonas RepID=I2BRL2_PSEFL
HAMP domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56895.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30149..30859)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BRP7_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56930.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_1_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31036..33300)
DNA (2265bp) protein (755aa)
parC; DNA topoisomerase IV subunit A (EC:5.99.1.-)
DNA topoisomerase 4 subunit A n=1 Tax=Pseudomonas sp. CF150 RepID=S6JD16_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33371..34366)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J596_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_1_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34366..36270)
DNA (1905bp) protein (635aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B n=4 Tax=Pseudomonas RepID=I2BN47_PSEFL
Displaying items 1-30 of 396 in total

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