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L1_008_000G1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 385 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_2_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..689)
DNA (687bp) protein (229aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IGQ2_9PSED
algP; alginate regulatory protein AlgP
Alginate regulatory protein AlgP {ECO:0000313|EMBL:EIK60733.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_2_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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882..1559
DNA (678bp) protein (226aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Pseudomonas RepID=I2BSF3_PSEFL
FKBP-type peptidyl-prolyl cis-trans isomerase
L1_008_000G1_scaffold_2_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1614..2072)
DNA (459bp) protein (153aa)
Transcriptional regulatory protein AlgQ n=3 Tax=Pseudomonas RepID=I2BTB6_PSEFL
algQ; transcriptional regulatory protein AlgQ
AlgQ protein {ECO:0000313|EMBL:AFJ57499.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2282..2803)
DNA (522bp) protein (174aa)
Disulfide bond formation protein B n=3 Tax=Pseudomonas RepID=I2BQV3_PSEFL
dsbB_2; disulfide bond formation protein B
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3040..4281)
DNA (1242bp) protein (414aa)
HemY protein, putative n=3 Tax=Pseudomonas RepID=I2BS90_PSEFL
hemY; HemY protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4287..5402)
DNA (1116bp) protein (372aa)
HemX protein n=3 Tax=Pseudomonas RepID=I2BPL8_PSEFL
hemX; HemX protein
HemX protein {ECO:0000313|EMBL:AFJ56201.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5421..6179)
DNA (759bp) protein (253aa)
hemD; uroporphyrinogen-III synthase (EC:4.2.1.75)
HemD protein {ECO:0000313|EMBL:AFJ58287.1}; EC=4.2.1.75 {ECO:0000313|EMBL:AFJ58287.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Uroporphyrinogen-III synthase n=3 Tax=Pseudomonas RepID=I2BVK4_PSEFL
L1_008_000G1_scaffold_2_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6176..7117)
DNA (942bp) protein (314aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=2 Tax=Pseudomonas RepID=S6GY36_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7256..8002)
DNA (747bp) protein (249aa)
DNA-binding response regulator AlgR n=4 Tax=Pseudomonas RepID=I2BS43_PSEFL
algR; DNA-binding response regulator AlgR
DNA-binding response regulator AlgR {ECO:0000313|EMBL:EIK62149.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_2_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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8504..9898
DNA (1395bp) protein (465aa)
argH_2; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Pseudomonas RepID=I2BQF6_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..10654)
DNA (660bp) protein (220aa)
glutathione S-transferase (EC:2.5.1.18)
Uncharacterized protein {ECO:0000313|EMBL:AFJ58144.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AFJ58144.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Glutathione S-transferase n=3 Tax=Pseudomonas RepID=I2BV61_PSEFL
L1_008_000G1_scaffold_2_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11064
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BTJ9_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_13
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..11414
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BWV3_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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11543..14422
DNA (2880bp) protein (960aa)
cyaA; adenylate cyclase, class I (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H2Y6_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14419..14832)
DNA (414bp) protein (138aa)
Regulator of nucleoside diphosphate kinase n=3 Tax=Pseudomonas RepID=I2BMY5_PSEFL
rnk; regulator of nucleoside diphosphate kinase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..15185)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BRI8_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56871.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15185..15517)
DNA (333bp) protein (111aa)
Protein CyaY n=3 Tax=Pseudomonas RepID=I2BX82_PSEFL
cyaY; iron donor protein CyaY
Protein CyaY {ECO:0000256|HAMAP-Rule:MF_00142, ECO:0000256|SAAS:SAAS00020372}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15756..15923
DNA (168bp) protein (56aa)
Lipopeptide n=9 Tax=Pseudomonas RepID=C3K434_PSEFS
Lipoprotein LppL-related protein
Uncharacterized protein {ECO:0000313|EMBL:ERH54977.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
L1_008_000G1_scaffold_2_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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15938..17185
DNA (1248bp) protein (416aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Pseudomonas RepID=I4KGK6_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17189..18019
DNA (831bp) protein (277aa)
dapF_2; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Diaminopimelate epimerase n=2 Tax=Pseudomonas RepID=I2BLJ5_PSEFL
L1_008_000G1_scaffold_2_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18033..18749
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BSJ4_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57227.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18752..19651
DNA (900bp) protein (300aa)
Tyrosine recombinase XerC n=3 Tax=Pseudomonas RepID=I2BQE2_PSEFL
sss; site-specific recombinase Sss
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19648..20343
DNA (696bp) protein (232aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 and 3 n=3 Tax=Pseudomonas RepID=I2BND1_PSEFL
HAD-superfamily hydrolase, subfamily IA, variant 1 and 3
Uncharacterized protein {ECO:0000313|EMBL:AFJ55764.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20471..20803)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BNH6_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20906..21331)
DNA (426bp) protein (142aa)
Secondary thiamine-phosphate synthase enzyme n=4 Tax=Pseudomonas RepID=I2BUI4_PSEFL
secondary thiamine-phosphate synthase enzyme
Uncharacterized protein {ECO:0000313|EMBL:AFJ57917.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_2_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21541..22878)
DNA (1338bp) protein (446aa)
Ammonium transporter n=1 Tax=Pseudomonas sp. CF150 RepID=S6ISG5_9PSED
ammonium transporter
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_27
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22913..23251)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=133 Tax=Pseudomonas RepID=A5WAV1_PSEP1
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AAY35263.1}; TaxID=205918 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae (strain B728a).;"
L1_008_000G1_scaffold_2_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23675..23938
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BK49_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24094..25590
DNA (1497bp) protein (499aa)
Putative magnesium chelatase protein n=2 Tax=Pseudomonas RepID=S6H2X5_9PSED
Mg-chelatase subunits D/I family, ComM subfamily protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_2_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25618..27594)
DNA (1977bp) protein (659aa)
Methyl-accepting chemotaxis protein n=3 Tax=Pseudomonas RepID=I2BNK6_PSEFL
methyl-accepting chemotaxis protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 1-30 of 385 in total

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