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L1_008_000G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 205 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_22_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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126..1025
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=3 Tax=Pseudomonas RepID=I2BMJ4_PSEFL
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ55477.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1142..2965
DNA (1824bp) protein (608aa)
Putative beta-lactamase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KJ87_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AFJ56179.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
beta-lactamase
L1_008_000G1_scaffold_22_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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2982..3773
DNA (792bp) protein (264aa)
MltA-interacting MipA family protein n=3 Tax=Pseudomonas RepID=I2BTD8_PSEFL
MltA-interacting MipA family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3910..5187)
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Sensor protein RstB, putative n=2 Tax=Pseudomonas RepID=I2BVF0_PSEFL
sensor protein RstB
L1_008_000G1_scaffold_22_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5188..5895)
DNA (708bp) protein (236aa)
Transcriptional regulatory protein RstA, putative n=2 Tax=Pseudomonas RepID=I2BZZ7_PSEFL
transcriptional regulatory protein RstA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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6053..7252
DNA (1200bp) protein (400aa)
Putative integral membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KT30_9PSED
major facilitator family transporter
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7208..7810)
DNA (603bp) protein (201aa)
miaE; tRNA-(ms[2]io[6]A)-hydroxylase (EC:1.-.-.-)
MiaE protein {ECO:0000313|EMBL:AFJ55620.1}; EC=1.-.-.- {ECO:0000313|EMBL:AFJ55620.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
tRNA-(Ms[2]io[6]A)-hydroxylase n=2 Tax=Pseudomonas RepID=I2BMY7_PSEFL
L1_008_000G1_scaffold_22_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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7960..8823
DNA (864bp) protein (288aa)
Universal stress protein family protein n=3 Tax=Pseudomonas RepID=I2BRD1_PSEFL
universal stress protein family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8958..9425)
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I4K3D7_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:EIK59227.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
hypothetical protein
L1_008_000G1_scaffold_22_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9806..12430
DNA (2625bp) protein (875aa)
Aconitate hydratase 2 n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XT49_PSEFL
acnB; aconitate hydrase B
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_11
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12795..13688
DNA (894bp) protein (298aa)
rhamnosyltransferase 1, subunit A (EC:2.4.1.-)
Rhamnosyltransferase chain A n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H0D7_9PSED
Rhamnosyltransferase A {ECO:0000313|EMBL:AGH13750.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
L1_008_000G1_scaffold_22_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13714..14985
DNA (1272bp) protein (424aa)
rhamnosyltransferase 1, subunit B (EC:2.4.1.-)
Uncharacterized protein {ECO:0000313|EMBL:AFJ57204.1}; EC=2.4.1.- {ECO:0000313|EMBL:AFJ57204.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Rhamnosyltransferase 1, subunit B n=2 Tax=Pseudomonas RepID=I2BSH1_PSEFL
L1_008_000G1_scaffold_22_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15103..15828
DNA (726bp) protein (242aa)
Transcriptional regulator RhlR n=1 Tax=Pseudomonas sp. CF150 RepID=S6JDM7_9PSED
rhlR; regulatory protein RhlR
RhlR protein {ECO:0000313|EMBL:AFJ56298.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15857..16435
DNA (579bp) protein (193aa)
rhlI; acyl-homoserine-lactone synthase (EC:2.3.1.184)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Acyl-homoserine-lactone synthase n=3 Tax=Pseudomonas RepID=I2BV89_PSEFL
L1_008_000G1_scaffold_22_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16488..17765)
DNA (1278bp) protein (426aa)
Tryptophan/tyrosine permease family protein n=2 Tax=Pseudomonas RepID=I2BU37_PSEFL
tryptophan/tyrosine permease family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57770.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18181..18417
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BWJ7_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58630.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18417..18593
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BWJ7_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58630.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18651..19097
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GVQ7_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19246..20199
DNA (954bp) protein (318aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=3 Tax=Pseudomonas RepID=I2BKZ7_PSEFL
D-isomer specific 2-hydroxyacid dehydrogenase family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54930.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20329..21396
DNA (1068bp) protein (356aa)
Putative phosphotransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J5S8_9PSED
phosphotransferase enzyme family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21418..22185
DNA (768bp) protein (256aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Pseudomonas RepID=I2BLC6_PSEFL
short chain dehydrogenase/reductase family oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AFJ55059.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22237..23967)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZT0_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23992..27360)
DNA (3369bp) protein (1123aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GX55_9PSED
type I secretion target
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27522..28955
DNA (1434bp) protein (478aa)
GntR family regulatory protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6ICV5_9PSED
GntR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29040..29441
DNA (402bp) protein (134aa)
Cupin domain protein n=2 Tax=Pseudomonas RepID=I2BT67_PSEFL
cupin domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57450.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29569..30198)
DNA (630bp) protein (210aa)
tag_1; DNA-3-methyladenine glycosylase 1 (EC:3.2.2.20)
Putative DNA-3-methyladenine glycosylase I n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H0E8_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30429..31739
DNA (1311bp) protein (437aa)
Aerobic C4-dicarboxylate transport protein n=3 Tax=Pseudomonas RepID=I2BRK9_PSEFL
aerobic C4-dicarboxylate transport protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56892.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31898..32599
DNA (702bp) protein (234aa)
Transcriptional regulator, GntR family n=3 Tax=Pseudomonas RepID=I2BPZ2_PSEFL
GntR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ56325.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_22_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32616..33302
DNA (687bp) protein (229aa)
Transcriptional regulator, GntR family n=2 Tax=Pseudomonas RepID=I2BLY9_PSEFL
GntR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_22_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33487..38355)
DNA (4869bp) protein (1623aa)
NAD-glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6I210_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 1-30 of 205 in total

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