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L1_008_000G1_scaffold_25

Search features with annotation key words

Displaying items 31-60 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_25_31
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23426..23908)
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridium RepID=B6FPM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23755.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AsnC family transcriptional regulator
L1_008_000G1_scaffold_25_32
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23918..24910)
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FPN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81989.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Hydrogenase maturation factor
L1_008_000G1_scaffold_25_33
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24921..26438)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23753.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_34
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26508..26609)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QP73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23752.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_35
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26688..28415)
DNA (1728bp) protein (576aa)
Fe-S oxidoreductase (EC:4.-.-.-)
B12 binding domain protein n=2 Tax=Clostridium RepID=B6FPN2_9CLOT
B12 binding domain protein {ECO:0000313|EMBL:EEA81991.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_25_36
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29075..29554)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81992.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_25_37
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29590..29940)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81993.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_25_38
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30265..30765)
DNA (501bp) protein (167aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=2 Tax=Clostridium RepID=B6FPN6_9CLOT
Cytosine/adenosine deaminases
L1_008_000G1_scaffold_25_39
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30812..31648)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PSL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23749.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_40
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31744..33150)
DNA (1407bp) protein (469aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PHB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23748.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_25_41
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33186..33893)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QP67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23747.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_42
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33907..34752)
DNA (846bp) protein (282aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEA81999.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EEA81999.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridium RepID=B6FPP0_9CLOT
L1_008_000G1_scaffold_25_43
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34773..35405)
DNA (633bp) protein (211aa)
Phosphopantetheine--protein transferase domain protein n=2 Tax=Clostridium RepID=B6FPP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23745.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_44
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35507..36040)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82001.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_25_45
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36031..36648)
DNA (618bp) protein (206aa)
DnaJ domain protein n=2 Tax=Clostridium RepID=B6FPP3_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:EEA82002.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_008_000G1_scaffold_25_46
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36655..37488)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QP61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23742.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_47
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37958..38833)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FPP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82004.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
conserved hypothetical protein (putative transposase or invertase)
L1_008_000G1_scaffold_25_48
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39166..40326)
DNA (1161bp) protein (387aa)
Metallo-beta-lactamase domain protein n=2 Tax=Clostridium RepID=B6FPP6_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEA82005.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized flavoproteins
L1_008_000G1_scaffold_25_49
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40676..42706)
DNA (2031bp) protein (677aa)
Glycosidases (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPP7_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82006.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_25_50
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42724..44565)
DNA (1842bp) protein (614aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium RepID=R6PHA3_9CLOT
microtubule-severing ATPase
L1_008_000G1_scaffold_25_51
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44580..45107)
DNA (528bp) protein (176aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEA82008.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EEA82008.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Clostridium RepID=B6FPP9_9CLOT
L1_008_000G1_scaffold_25_52
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45083..46504)
DNA (1422bp) protein (474aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=2 Tax=Clostridium RepID=B6FPQ0_9CLOT
L1_008_000G1_scaffold_25_53
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46560..47975)
DNA (1416bp) protein (472aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PJK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23735.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_25_54
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48066..48395)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PSK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23734.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Septum formation initiator.
L1_008_000G1_scaffold_25_55
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48440..48793)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FPQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23733.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Spore cortex protein YabQ (Spore_YabQ).
L1_008_000G1_scaffold_25_56
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48801..49085)
DNA (285bp) protein (95aa)
Sporulation protein YabP n=2 Tax=Clostridium RepID=B6FPQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23732.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sporulation protein YabP
L1_008_000G1_scaffold_25_57
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49198..49437)
DNA (240bp) protein (80aa)
S4 domain protein n=2 Tax=Clostridium RepID=B6FPQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23731.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000G1_scaffold_25_58
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49546..49821)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPQ7_9CLOT
DNA-binding protein HU {ECO:0000313|EMBL:EEA82016.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Bacterial nucleoid DNA-binding protein
L1_008_000G1_scaffold_25_59
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50020..51753)
DNA (1734bp) protein (578aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=2 Tax=Clostridium RepID=B6FPQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23729.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_25_60
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51802..52806)
DNA (1005bp) protein (335aa)
Spore coat protein, CotS family n=2 Tax=Clostridium RepID=B6FPQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23728.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
CotS family spore coat protein
Displaying items 31-60 of 225 in total

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