ggKbase home page

L1_008_000G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_27_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1423..1935
DNA (513bp) protein (171aa)
Ferritin-like protein n=3 Tax=Bacteroides RepID=A5ZKB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17317.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_27_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2122..3075
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Methylenetetrahydrofolate reductase n=3 Tax=Bacteroides RepID=A5ZKB4_9BACE
5,10-methylenetetrahydrofolate reductase
L1_008_000G1_scaffold_27_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3077..4201
DNA (1125bp) protein (375aa)
DNA polymerase III, gamma/tau subunits (EC:2.7.7.7)
Putative DNA polymerase III, delta' subunit n=2 Tax=Bacteroides RepID=A5ZKB3_9BACE
Putative DNA polymerase III delta' subunit {ECO:0000313|EMBL:CCZ72559.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_27_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4216..5661
DNA (1446bp) protein (482aa)
PSP1 C-terminal domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZKB2_9BACE
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EDM19600.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Uncharacterized homolog of PSP1
L1_008_000G1_scaffold_27_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5690..6118
DNA (429bp) protein (143aa)
Gliding motility-associated lipoprotein GldH n=2 Tax=root RepID=A5ZKB1_9BACE
Gliding motility-associated lipoprotein GldH {ECO:0000313|EMBL:EDM19599.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_27_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6131..7588)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UWG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17322.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Bacterial cell division membrane protein
L1_008_000G1_scaffold_27_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7569..9431)
DNA (1863bp) protein (621aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=2 Tax=Bacteroides RepID=A5ZKA8_9BACE
Penicillin-binding protein 2 {ECO:0000313|EMBL:EDM19596.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_27_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9434..9931)
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=3 Tax=Bacteroides RepID=A5ZKA7_9BACE
Rod shape-determining protein MreD {ECO:0000313|EMBL:EIY17324.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_27_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9928..10773)
DNA (846bp) protein (282aa)
Cell shape-determining protein MreC n=3 Tax=Bacteroides RepID=A5ZKA6_9BACE
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rod shape-determining protein MreC
L1_008_000G1_scaffold_27_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10792..11814)
DNA (1023bp) protein (341aa)
Cell shape determining protein, MreB/Mrl family n=4 Tax=root RepID=A5ZKA5_9BACE
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EIY17326.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rod shape-determining protein MreB
L1_008_000G1_scaffold_27_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11830..13482)
DNA (1653bp) protein (551aa)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=2 Tax=root RepID=I8UWG9_9BACE
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_27_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13504..15564)
DNA (2061bp) protein (687aa)
Peptidase family M13 {ECO:0000313|EMBL:EDM19591.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDM19591.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
endothelin-converting enzyme . Metallo peptidase. MEROPS family M13 (EC:3.4.24.- 3.4.24.71)
Peptidase family M13 n=2 Tax=Bacteroides caccae RepID=A5ZKA3_9BACE
L1_008_000G1_scaffold_27_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15561..17516)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U390_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72568.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter ATP-binding protein
L1_008_000G1_scaffold_27_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17659..18570)
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17330.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_27_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18696..21038)
DNA (2343bp) protein (781aa)
Outer membrane protein, OMP85 family n=3 Tax=root RepID=A5ZKA0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17331.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_27_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21041..25552)
DNA (4512bp) protein (1504aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZK99_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19587.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_27_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25715..28006)
DNA (2292bp) protein (764aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides RepID=A5ZK97_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM19585.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Signal transduction histidine kinase
L1_008_000G1_scaffold_27_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28025..29383)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=2 Tax=Bacteroides RepID=A5ZK96_9BACE
MATE efflux family protein {ECO:0000313|EMBL:CCZ72573.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_27_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29380..30612)
DNA (1233bp) protein (411aa)
Peptidase M16 inactive domain protein n=3 Tax=Bacteroides RepID=A5ZK95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72574.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted Zn-dependent peptidases
L1_008_000G1_scaffold_27_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30618..31457)
DNA (840bp) protein (280aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3K7_9BACE
L1_008_000G1_scaffold_27_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31548..32918
DNA (1371bp) protein (457aa)
Sigma-54 interaction domain protein n=2 Tax=Bacteroides caccae RepID=A5ZK93_9BACE
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDM19581.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L1_008_000G1_scaffold_27_22
unknown

Not on your lists

comp(32922..33077)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000G1_scaffold_27_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33091..34473
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UV26_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72577.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_27_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34518..36074
DNA (1557bp) protein (519aa)
Arylsulfatase {ECO:0000313|EMBL:EDM19579.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDM19579.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arylsulfatase n=2 Tax=Bacteroides caccae RepID=A5ZK91_9BACE
secreted sulfatase ydeN
L1_008_000G1_scaffold_27_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36344..36613
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZK90_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72579.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_27_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36794..37741
DNA (948bp) protein (316aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZK89_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17341.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_27_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38306..38977)
DNA (672bp) protein (224aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDM19576.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDM19576.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase, RluA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZK88_9BACE
L1_008_000G1_scaffold_27_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38987..39733)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDM19575.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDM19575.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Bacteroides caccae RepID=A5ZK87_9BACE
L1_008_000G1_scaffold_27_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39750..40340)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=3 Tax=Bacteroides RepID=A5ZK86_9BACE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDM19574.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator
L1_008_000G1_scaffold_27_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40847..41209)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UT60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74331.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AraC-type DNA-binding domain-containing proteins
Displaying items 1-30 of 196 in total

View Taxonomy