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L1_008_000G1_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_28_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78..527)
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BWS0_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58703.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

723..872
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BXJ1_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58974.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..1514)
DNA (633bp) protein (211aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J3P0_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1782..2099)
DNA (318bp) protein (106aa)
Cell division protein ZapA, putative n=3 Tax=Pseudomonas RepID=I2BSZ1_PSEFL
zapA; cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2096..2305)
DNA (210bp) protein (70aa)
TIGR02449 family protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3H8T9_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELQ16215.1}; TaxID=1205750 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BRIP34879.;"
L1_008_000G1_scaffold_28_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2444..3001
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BYB3_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..4344
DNA (1323bp) protein (441aa)
pepP; Xaa-Pro aminopeptidase (EC:3.4.11.9)
PepP protein {ECO:0000313|EMBL:AFJ58584.1}; EC=3.4.11.9 {ECO:0000313|EMBL:AFJ58584.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Xaa-Pro aminopeptidase n=3 Tax=Pseudomonas RepID=I2BWF1_PSEFL
L1_008_000G1_scaffold_28_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..5528
DNA (1188bp) protein (396aa)
ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase (EC:1.14.13.-)
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IFD3_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5521..6006
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6IQT0_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6009..7232
DNA (1224bp) protein (408aa)
ubiquinone biosynthesis hydroxylase (EC:1.14.13.-)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BKY4_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7395..8399
DNA (1005bp) protein (335aa)
Ferric iron ABC transporter, FeT family, periplasmic ferric iron-binding protein, putative n=3 Tax=Pseudomonas RepID=I2BYB7_PSEFL
ferric iron ABC transporter, FeT family, periplasmic ferric iron-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59250.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8550..10166
DNA (1617bp) protein (539aa)
Putative iron (III) ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBI5_9PSED
ferric iron ABC transporter, FeT family, permease protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10323..11405
DNA (1083bp) protein (361aa)
gcvT_2; glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Aminomethyltransferase n=4 Tax=Pseudomonas RepID=I2BV64_PSEFL
L1_008_000G1_scaffold_28_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11458..11841
DNA (384bp) protein (128aa)
Glycine cleavage system H protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6G9_9PSED
gcvH_2; glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11972..13114)
DNA (1143bp) protein (381aa)
Aminotransferase, DegT/DnrJ/EryC1/StrS family n=3 Tax=Pseudomonas RepID=I2BZK1_PSEFL
DegT/DnrJ/EryC1/StrS family aminotransferase
Uncharacterized protein {ECO:0000313|EMBL:AFJ59684.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_16
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13279..13593)
DNA (315bp) protein (105aa)
Uncharacterized protein n=7 Tax=Pseudomonas RepID=I2BMM8_PSEFL
ribonucleotide reductase
Uncharacterized protein {ECO:0000313|EMBL:EIK72522.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_28_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13662..14108)
DNA (447bp) protein (149aa)
Nodulation efficiency protein D (NfeD) family protein n=3 Tax=Pseudomonas RepID=I2BKY5_PSEFL
nodulation efficiency protein D (NfeD) family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_18
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14119..15039)
DNA (921bp) protein (307aa)
HflC/HflK family protein n=5 Tax=Pseudomonas RepID=I2BR24_PSEFL
HflC/HflK family protein
HflC/HflK family protein {ECO:0000313|EMBL:EIK73181.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_28_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15116..16810)
DNA (1695bp) protein (565aa)
Putative secretion-related ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6H3_9PSED
Type II/IV secretion system protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54884.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16890..17228)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BQY8_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56671.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17344..17826
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=2 Tax=Pseudomonas RepID=UPI000365E351
AsnC family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17898..19265)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBK2_9PSED
adenylate cyclase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19424..20572
DNA (1149bp) protein (383aa)
argE_2; acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Acetylornithine deacetylase n=2 Tax=Pseudomonas RepID=I2BUH9_PSEFL
L1_008_000G1_scaffold_28_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20706..22004
DNA (1299bp) protein (433aa)
argA; amino-acid N-acetyltransferase (EC:2.3.1.1)
Amino-acid acetyltransferase n=2 Tax=Pseudomonas RepID=I2BNN3_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22118..23104)
DNA (987bp) protein (329aa)
tauA_1; taurine ABC transporter, periplasmic taurine-binding protein (EC:3.6.3.36)
Taurine ABC transporter, periplasmic binding protein n=2 Tax=Pseudomonas RepID=S6H594_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_28_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23475..24818
DNA (1344bp) protein (448aa)
Outer membrane porin OprE n=3 Tax=Pseudomonas RepID=I2BK67_PSEFL
oprE; outer membrane porin OprE
OprE protein {ECO:0000313|EMBL:AFJ54650.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_27
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25093..25731
DNA (639bp) protein (213aa)
lsfA; thiol-specific antioxidant protein LsfA (EC:1.11.1.15)
Thiol-specific antioxidant protein LsfA {ECO:0000313|EMBL:EIK73769.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EIK73769.1};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
Thiol-specific antioxidant protein LsfA n=5 Tax=Pseudomonas RepID=I2BQS1_PSEFL
L1_008_000G1_scaffold_28_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26050..26643
DNA (594bp) protein (198aa)
NADH-dependent FMN reductase n=2 Tax=Pseudomonas RepID=I2BL56_PSEFL
ssuE; NADH-dependent FMN reductase
SsuE protein {ECO:0000313|EMBL:AFJ54989.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26741..27709
DNA (969bp) protein (323aa)
Aliphatic sulfonates ABC transporter, periplasmic sulfonate-binding protein n=2 Tax=Pseudomonas RepID=I2BRW0_PSEFL
ssuA; aliphatic sulfonates ABC transporter, periplasmic sulfonate-binding protein
SsuA protein {ECO:0000313|EMBL:AFJ56993.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_28_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27736..28884
DNA (1149bp) protein (383aa)
ssuD; alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Alkanesulfonate monooxygenase n=4 Tax=Pseudomonas RepID=I2BQP4_PSEFL
Displaying items 1-30 of 223 in total

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