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L1_008_000G1_scaffold_32

Search features with annotation key words

Displaying items 31-60 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_32_31
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35504..36796)
DNA (1293bp) protein (431aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q876_9BIFI
L1_008_000G1_scaffold_32_32
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36937..37713)
DNA (777bp) protein (259aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Methionine aminopeptidase n=4 Tax=Bifidobacterium dentium RepID=D2Q914_BIFDB
L1_008_000G1_scaffold_32_33
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37752..38486)
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q878_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41020.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
integral membrane protein
L1_008_000G1_scaffold_32_34
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38662..40743
DNA (2082bp) protein (694aa)
Peptidase family M13 {ECO:0000313|EMBL:ETO98280.1}; EC=3.4.24.- {ECO:0000313|EMBL:ETO98280.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
pepO; pepO Zinc metalloprotease (EC:3.4.24.11)
Peptidase family M13 n=2 Tax=Bifidobacterium dentium RepID=E0Q879_9BIFI
L1_008_000G1_scaffold_32_35
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40756..41481)
DNA (726bp) protein (242aa)
Single-strand binding family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q880_9BIFI
Single-strand binding family protein {ECO:0000313|EMBL:EFM41022.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Single-strand DNA binding protein
L1_008_000G1_scaffold_32_36
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(41826..43634)
DNA (1809bp) protein (603aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
proS; proS Prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2Q910_BIFDB
L1_008_000G1_scaffold_32_37
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43812..44198
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q882_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM41024.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_38
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44218..45624)
DNA (1407bp) protein (469aa)
helicase (EC:3.1.11.5)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q883_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41025.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_39
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45726..46619)
DNA (894bp) protein (298aa)
Cof-like hydrolase {ECO:0000313|EMBL:EFM41026.1}; EC=3.1.3.23 {ECO:0000313|EMBL:EFM41026.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hydrolase (EC:3.1.3.18)
Cof-like hydrolase n=2 Tax=Bifidobacterium dentium RepID=E0Q884_9BIFI
L1_008_000G1_scaffold_32_40
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46705..47358)
DNA (654bp) protein (218aa)
Orn Oligoribonuclease n=4 Tax=Bifidobacterium dentium RepID=D2Q906_BIFDB
orn; orn Oligoribonuclease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26593.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_32_41
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47480..48760)
DNA (1281bp) protein (427aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q886_9BIFI
scrT; sucrose transporter
ScrT Sucrose transporter {ECO:0000313|EMBL:ADB09291.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_32_42
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48789..50546)
DNA (1758bp) protein (586aa)
agl2; alpha-glucosidase (EC:3.2.1.54)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q887_9BIFI
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFM41029.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_43
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50880..51914
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q888_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFM41030.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_32_44
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52475..53458
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q889_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO98171.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
CTP synthase (UTP-ammonia lyase)
L1_008_000G1_scaffold_32_45
unknown

Not on your lists

53579..54121
DNA (543bp) protein (181aa)

This feature has no annotations

L1_008_000G1_scaffold_32_46
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54081..55607)
DNA (1527bp) protein (509aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Bifidobacterium dentium RepID=B1S4Z6_9BIFI
L1_008_000G1_scaffold_32_47
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55765..56904)
DNA (1140bp) protein (380aa)
rfe; rfe undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase (EC:2.7.8.13)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EFM41033.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFM41033.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Rfe Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q8Z2_BIFDB
L1_008_000G1_scaffold_32_48
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56901..57563)
DNA (663bp) protein (221aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q892_9BIFI
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EFM41034.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Sua5/YciO/YrdC/YwlC family protein
L1_008_000G1_scaffold_32_49
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57612..58316)
DNA (705bp) protein (235aa)
livF; branched-chain amino acid transport ATP-binding protein livF (EC:3.6.3.30)
Branched-chain amino acid transport ATP-binding protein livF n=4 Tax=Bifidobacterium dentium RepID=D2Q8Z0_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO98066.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_32_50
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58316..59116)
DNA (801bp) protein (267aa)
livG; branched-chain amino acid transport ATP-binding protein livG (EC:3.6.3.31)
Branched-chain amino acid transport ATP-binding protein livG n=3 Tax=Bifidobacterium dentium RepID=D2Q8Y9_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26574.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_32_51
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59113..60204)
DNA (1092bp) protein (364aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q895_9BIFI
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFM41037.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
branched-chain amino acid ABC transporter permease
L1_008_000G1_scaffold_32_52
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60207..61133)
DNA (927bp) protein (309aa)
Branched-chain amino acid transport system permease protein n=4 Tax=Bifidobacterium dentium RepID=D2Q8Y7_BIFDB
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ETO98094.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_32_53
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61164..62360)
DNA (1197bp) protein (399aa)
Receptor family ligand-binding protein n=3 Tax=Bifidobacterium dentium RepID=B1S514_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26571.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
L1_008_000G1_scaffold_32_54
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62424..63377)
DNA (954bp) protein (318aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hemK; hemK Peptide release factor-glutamine N5-methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q898_9BIFI
L1_008_000G1_scaffold_32_55
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63386..64474)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=2 Tax=Bifidobacterium dentium RepID=E0Q899_9BIFI
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
peptide chain release factor 1
L1_008_000G1_scaffold_32_56
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(64633..64845)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=4 Tax=Bifidobacterium dentium RepID=D2Q8Y3_BIFDB
rpmE2; 50S ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_32_57
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65264..66109
DNA (846bp) protein (282aa)
Phage integrase SAM-like domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S518_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26567.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
phage integrase
L1_008_000G1_scaffold_32_58
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66089..66331)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S519_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09267.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_32_59
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66328..66981)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S520_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09266.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_32_60
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67116..67358)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S521_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09265.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 31-60 of 219 in total

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