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L1_008_000G1_scaffold_32

Search features with annotation key words

Displaying items 121-150 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_32_121
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134012..134857)
DNA (846bp) protein (282aa)
tRNA (m(7)G46) methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q8R8_BIFDB
L1_008_000G1_scaffold_32_122
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

134983..136062
DNA (1080bp) protein (360aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KFI96569.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KFI96569.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
UDP-glucose 4-epimerase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D9_BIFAA
UDP-glucose 4-epimerase
L1_008_000G1_scaffold_32_123
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136227..136820
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8E5_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM41087.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_124
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137147..137644)
DNA (498bp) protein (166aa)
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EFM41088.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EFM41088.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ptpA; protein tyrosine phosphatase (EC:3.1.3.2)
Low molecular weight phosphotyrosine protein phosphatase n=3 Tax=Bifidobacterium dentium RepID=B1S5Q9_9BIFI
L1_008_000G1_scaffold_32_125
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137653..138318)
DNA (666bp) protein (222aa)
Dihydrofolate reductase {ECO:0000313|EMBL:EFM41089.1}; EC=1.5.1.3 {ECO:0000313|EMBL:EFM41089.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
dfrA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q8E7_9BIFI
L1_008_000G1_scaffold_32_126
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138376..139176)
DNA (801bp) protein (267aa)
thyA; thyA Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Thymidylate synthase n=2 Tax=Bifidobacterium dentium RepID=D2Q8R2_BIFDB
L1_008_000G1_scaffold_32_127
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139421..139834
DNA (414bp) protein (138aa)
OsmC-like protein n=4 Tax=Bifidobacterium dentium RepID=B1S5R2_9BIFI
hypothetical protein
OsmC-like protein {ECO:0000313|EMBL:EFM41091.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_128
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139957..140991)
DNA (1035bp) protein (345aa)
Universal stress protein family member n=4 Tax=Bifidobacterium dentium RepID=D2Q8R0_BIFDB
Universal stress protein family member
Universal stress protein family member {ECO:0000313|EMBL:ADB09196.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_32_129
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141163..141900)
DNA (738bp) protein (246aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8F1_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:EFM41093.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_32_130
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141968..142924)
DNA (957bp) protein (319aa)
surface antigen (EC:3.5.1.28)
CHAP domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8F2_9BIFI
CHAP domain protein {ECO:0000313|EMBL:EFM41094.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_131
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142956..144275
DNA (1320bp) protein (440aa)
Putative phosphoserine transaminase {ECO:0000313|EMBL:EFM41095.1}; EC=2.6.1.52 {ECO:0000313|EMBL:EFM41095.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phosphoserine aminotransferase (EC:2.6.1.52)
SerC Phosphoserine aminotransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q8Q7_BIFDB
L1_008_000G1_scaffold_32_132
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144272..145657)
DNA (1386bp) protein (462aa)
Phosphomannose isomerase type I {ECO:0000313|EMBL:EFM41096.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EFM41096.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Phosphomannose isomerase type I n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8F4_9BIFI
L1_008_000G1_scaffold_32_133
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145723..145977
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5R8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM41097.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_134
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145984..147069)
DNA (1086bp) protein (362aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Pho-related sensory transduction protein kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8F6_9BIFI
L1_008_000G1_scaffold_32_135
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

147375..148055
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Bifidobacterium dentium RepID=E0Q8F7_9BIFI
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Pho-related response regulator of two-component system
L1_008_000G1_scaffold_32_136
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

148227..150107
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8F8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41100.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
linoleic acid isomerase
L1_008_000G1_scaffold_32_137
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150303..151043)
DNA (741bp) protein (247aa)
pmg2; phosphoglucomutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium dentium RepID=D2Q8Q1_BIFDB
L1_008_000G1_scaffold_32_138
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(151200..152285)
DNA (1086bp) protein (362aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Bifidobacterium dentium RepID=E1ND83_9BIFI
menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase
L1_008_000G1_scaffold_32_139
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152759..153022
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8G3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41105.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_140
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153485..155221)
DNA (1737bp) protein (579aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=4 Tax=Bifidobacterium dentium RepID=D2Q8P9_BIFDB
L1_008_000G1_scaffold_32_141
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155544..158390
DNA (2847bp) protein (949aa)
beta-glucosidase (EC:3.2.1.21)
Putative Beta-glucosidase {ECO:0000313|EMBL:ADB09184.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ADB09184.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=B1S688_9BIFI
L1_008_000G1_scaffold_32_142
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158417..158692
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S689_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09183.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_32_143
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158757..160112)
DNA (1356bp) protein (452aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8G7_9BIFI
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFM41109.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
two-component sensor kinase
L1_008_000G1_scaffold_32_144
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160105..160836)
DNA (732bp) protein (244aa)
two-component response regulator (EC:3.1.1.61)
LytTr DNA-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8G8_9BIFI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFM41110.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_32_145
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160990..162201
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=B1S692_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM41111.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraJ-like protein
L1_008_000G1_scaffold_32_146
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

162524..164341
DNA (1818bp) protein (606aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41113.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM41113.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter permease (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8H1_9BIFI
L1_008_000G1_scaffold_32_147
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164286..166079
DNA (1794bp) protein (598aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41114.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM41114.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8H2_9BIFI
L1_008_000G1_scaffold_32_148
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

166194..167810
DNA (1617bp) protein (539aa)
Narrowly conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q8P0_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26474.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
hypothetical protein
L1_008_000G1_scaffold_32_149
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(167799..168329)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8H4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41116.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_32_150
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168326..170209)
DNA (1884bp) protein (628aa)
PspC domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8H5_9BIFI
PspC domain protein {ECO:0000313|EMBL:EFM41117.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
Displaying items 121-150 of 219 in total

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