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L1_008_000G1_scaffold_42

Search features with annotation key words

Displaying items 181-210 of 228 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_42_181
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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148012..148119
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JD93_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_182
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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148509..149792
DNA (1284bp) protein (428aa)
Putative oxidoreductase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KX53_9PSED
FAD dependent oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AFJ59556.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_183
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149835..150806)
DNA (972bp) protein (324aa)
Xanthine dehydrogenase accessory factor, putative n=3 Tax=Pseudomonas RepID=I2BSP7_PSEFL
xanthine dehydrogenase accessory factor
Uncharacterized protein {ECO:0000313|EMBL:AFJ57280.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_184
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150808..152043)
DNA (1236bp) protein (412aa)
Cytochrome c family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BLM8_PSEFL
cytochrome c family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_185
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152046..152585)
DNA (540bp) protein (180aa)
2Fe-2S binding domain protein n=3 Tax=Pseudomonas RepID=I2BTH1_PSEFL
2Fe-2S binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57554.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_186
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152578..155409)
DNA (2832bp) protein (944aa)
Twin-arginine translocation pathway signal n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GQZ5_9PSED
aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_187
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156296..157060)
DNA (765bp) protein (255aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=3 Tax=Pseudomonas RepID=I2BWX3_PSEFL
short chain dehydrogenase/reductase family oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AFJ58756.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_188
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157072..158283)
DNA (1212bp) protein (404aa)
metZ; O-succinylhomoserine sulfhydrylase (EC:4.2.99.-)
MetZ protein {ECO:0000313|EMBL:AFJ59255.1}; EC=4.2.99.- {ECO:0000313|EMBL:AFJ59255.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
O-succinylhomoserine sulfhydrylase n=4 Tax=Pseudomonas RepID=C3JZS0_PSEFS
L1_008_000G1_scaffold_42_189
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158349..159854)
DNA (1506bp) protein (502aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Amidophosphoribosyltransferase n=4 Tax=Pseudomonas RepID=I2BLN9_PSEFL
L1_008_000G1_scaffold_42_190
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159896..160453)
DNA (558bp) protein (186aa)
CvpA family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BWY0_PSEFL
CvpA family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58763.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_191
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160696..161364)
DNA (669bp) protein (223aa)
Cell division protein DedD n=3 Tax=Pseudomonas RepID=I2BQ48_PSEFL
dedD; cell division protein DedD
DedD protein {ECO:0000313|EMBL:AFJ56381.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_192
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161348..162655)
DNA (1308bp) protein (436aa)
folC; bifunctional protein folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17 6.3.2.12)
Bifunctional protein FolC n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BL98_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_193
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162652..163572)
DNA (921bp) protein (307aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=2 Tax=Pseudomonas RepID=I2BND3_PSEFL
L1_008_000G1_scaffold_42_194
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163818..164450)
DNA (633bp) protein (211aa)
trpF; N-(5'phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KFM0_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_195
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164514..165368)
DNA (855bp) protein (285aa)
UPI0003D699DD related cluster n=1 Tax=unknown RepID=UPI0003D699DD
tRNA pseudouridine synthase A
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_196
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165582..168107)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JDA9_9PSED
fimV; twitching motility protein FimV
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_197
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168269..169279)
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HU07_9PSED
aspartate-semialdehyde dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFJ57308.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_198
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169529..170641)
DNA (1113bp) protein (371aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=4 Tax=Pseudomonas RepID=I2BV96_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_199
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170706..171788)
DNA (1083bp) protein (361aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3-isopropylmalate dehydrogenase n=3 Tax=Pseudomonas RepID=I2BLD1_PSEFL
L1_008_000G1_scaffold_42_200
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171842..172606)
DNA (765bp) protein (255aa)
Putative methyltransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JAS1_9PSED
UbiE/COQ5 family methyltransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_201
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172736..173380)
DNA (645bp) protein (215aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3-isopropylmalate dehydratase small subunit n=3 Tax=Pseudomonas RepID=I2BQU0_PSEFL
L1_008_000G1_scaffold_42_202
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173391..174809)
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Pseudomonas RepID=I4K9H0_PSEFL
L1_008_000G1_scaffold_42_203
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174950..175840
DNA (891bp) protein (297aa)
Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CFT9 RepID=S6I4L6_9PSED
LysR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_204
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175907..179185
DNA (3279bp) protein (1093aa)
Sensory box/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas RepID=I2BLD7_PSEFL
sensory box/GGDEF domain/EAL domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55070.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_205
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179195..180154)
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase n=2 Tax=Pseudomonas RepID=I2BXF7_PSEFL
dusC; tRNA-dihydrouridine synthase C
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_206
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180210..180644)
DNA (435bp) protein (145aa)
Putative thioesterase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JDB7_9PSED
thioesterase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_207
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180683..181516)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KX74_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57514.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_208
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181532..182071)
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=3 Tax=Pseudomonas RepID=I2BR87_PSEFL
TetR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ56770.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_42_209
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182918..184399)
DNA (1482bp) protein (494aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Pseudomonas RepID=I2BM19_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_42_210
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184584..186599)
DNA (2016bp) protein (672aa)
uvrB; excinuclease ABC subunit B (EC:3.1.25.-)
UvrABC system protein B n=4 Tax=Pseudomonas RepID=I2BKD0_PSEFL
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Displaying items 181-210 of 228 in total

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