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L1_008_000G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_43_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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247..825
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9ESF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23269.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


838..1023
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=52 Tax=Bacteroides RepID=RL32_BACFR
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L1_008_000G1_scaffold_43_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1112..2119
DNA (1008bp) protein (336aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=3 Tax=Bacteroides RepID=A5ZKC5_9BACE
L1_008_000G1_scaffold_43_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2208..3089
DNA (882bp) protein (294aa)
GTPase Era n=3 Tax=Bacteroides RepID=A5ZKC6_9BACE
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
era; GTP-binding protein Era
L1_008_000G1_scaffold_43_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3137..4450
DNA (1314bp) protein (438aa)
GTPase Der n=3 Tax=Bacteroides RepID=A5ZKC7_9BACE
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribosome-associated GTPase EngA
L1_008_000G1_scaffold_43_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4532..5293)
DNA (762bp) protein (254aa)
ABC-type (unclassified) transport system, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZKC8_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM19616.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_43_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5369..6112
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23275.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6109..6879
DNA (771bp) protein (257aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZKD0_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM19618.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component
L1_008_000G1_scaffold_43_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6972..7217)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23277.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNA-binding protein rbpA
L1_008_000G1_scaffold_43_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7265..7519
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73365.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_43_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7615..8970
DNA (1356bp) protein (452aa)
Trigger factor n=3 Tax=Bacteroides RepID=A5ZKD3_9BACE
Trigger factor {ECO:0000313|EMBL:EIY23279.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
trigger factor
L1_008_000G1_scaffold_43_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9113..9775
DNA (663bp) protein (221aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacteroides RepID=A5ZKD4_9BACE
L1_008_000G1_scaffold_43_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9778..11022
DNA (1245bp) protein (415aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Bacteroides caccae RepID=A5ZKD5_9BACE
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L1_008_000G1_scaffold_43_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11192..13372
DNA (2181bp) protein (727aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=3 Tax=Bacteroides RepID=A5ZKD6_9BACE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CCZ73361.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_43_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13460..14938
DNA (1479bp) protein (493aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Bacteroides caccae RepID=A5ZKD7_9BACE
L1_008_000G1_scaffold_43_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15072..16619
DNA (1548bp) protein (516aa)
PPIC-type PPIASE domain protein n=2 Tax=Bacteroides RepID=A5ZKD8_9BACE
PPIC-type PPIASE domain protein {ECO:0000313|EMBL:EDM19626.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
peptidyl-prolyl cis-trans isomerase
L1_008_000G1_scaffold_43_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16674..17519
DNA (846bp) protein (282aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5U5K4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73358.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_43_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17529..18911
DNA (1383bp) protein (461aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=3 Tax=Bacteroides RepID=A5ZKE0_9BACE
L1_008_000G1_scaffold_43_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18933..20651
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VD86_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23287.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20653..20955
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23288.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21010..22911
DNA (1902bp) protein (634aa)
DNA mismatch repair protein MutL n=2 Tax=Bacteroides caccae RepID=A5ZKE3_9BACE
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA mismatch repair protein MutL
L1_008_000G1_scaffold_43_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23015..24202
DNA (1188bp) protein (396aa)
OmpA family protein n=2 Tax=Bacteroides RepID=A5ZKE4_9BACE
OmpA family protein {ECO:0000313|EMBL:CCZ73353.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L1_008_000G1_scaffold_43_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24485..26473)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UX98_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73352.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glycoside hydrolase
L1_008_000G1_scaffold_43_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26570..27208)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8VD90_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23292.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27586..28287)
DNA (702bp) protein (234aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKE7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19635.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_43_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28326..28784)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9ESI0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23294.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_27
unknown

Not on your lists

comp(28824..28961)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_000G1_scaffold_43_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29293..30387)
DNA (1095bp) protein (365aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EDM19639.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EDM19639.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZKF1_9BACE
L1_008_000G1_scaffold_43_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30735..33956
DNA (3222bp) protein (1074aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Bacteroides caccae RepID=A5ZKF2_9BACE
glutamine-dependent carbamyl phosphate synthetase
L1_008_000G1_scaffold_43_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34076..34849
DNA (774bp) protein (258aa)
UPF0246 protein HMPREF1061_00029 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VD95_9BACE
UPF0246 protein HMPREF1061_00029 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 169 in total

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