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L1_008_000G1_scaffold_43

Search features with annotation key words

Displaying items 121-150 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_43_121
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

134629..138042
DNA (3414bp) protein (1138aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UC17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73149.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_43_122
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

138055..140469
DNA (2415bp) protein (805aa)
Cytochrome c-type biogenesis protein CcsB n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U561_9BACE
Cytochrome c-type biogenesis protein CcsB {ECO:0000313|EMBL:CCZ73150.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cytochrome c biogenesis protein
L1_008_000G1_scaffold_43_123
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

140491..141375
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UPU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73151.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_43_124
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

141583..142215
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UWN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73152.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Acetyltransferase (isoleucine patch superfamily)
L1_008_000G1_scaffold_43_125
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

142390..142932
DNA (543bp) protein (181aa)
Glutathione peroxidase n=2 Tax=Bacteroides caccae RepID=A5ZFJ2_9BACE
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glutathione peroxidase
L1_008_000G1_scaffold_43_126
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(142910..143428)
DNA (519bp) protein (173aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides RepID=A5ZFJ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23393.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
NTP pyrophosphohydrolase
L1_008_000G1_scaffold_43_127
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(143487..144707)
DNA (1221bp) protein (407aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFJ4_9BACE
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L1_008_000G1_scaffold_43_128
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

145584..146450
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=A5ZFK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73156.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_43_129
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(146567..147628)
DNA (1062bp) protein (354aa)
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.- {ECO:0000256|SAAS:SAAS00272647};; EC=4.2.3.4 {ECO:0000256|SAAS:SAAS00210855};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=3 Tax=Bacteroides RepID=A5ZFK6_9BACE
L1_008_000G1_scaffold_43_130
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

147710..148114
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZFK7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73158.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_43_131
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

148198..151116
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFK8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20968.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_43_132
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

151244..152683
DNA (1440bp) protein (480aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cardiolipin synthetase 2 (EC:2.7.8.-)
Phospholipase D domain protein n=3 Tax=Bacteroides RepID=A5ZFK9_9BACE
L1_008_000G1_scaffold_43_133
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(152705..153238)
DNA (534bp) protein (178aa)
Putative RNA methyltransferase, RsmD family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFL0_9BACE
Putative RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EDM20970.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
methyltransferase
L1_008_000G1_scaffold_43_134
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153229..153999)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZFL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20971.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_43_135
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153999..154685)
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZFL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23402.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_43_136
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

154781..156199
DNA (1419bp) protein (473aa)
PIF1 helicase. (EC:3.1.11.5)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q3C2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73164.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_43_137
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(156339..158063)
DNA (1725bp) protein (575aa)
Conserved domain protein n=2 Tax=Bacteroides caccae RepID=A5ZFL4_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM20974.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
conserved hypothetical lipoprotein
L1_008_000G1_scaffold_43_138
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(158084..161470)
DNA (3387bp) protein (1129aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFL5_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM20975.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative TonB-dependent outer membrane receptor exported protein
L1_008_000G1_scaffold_43_139
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

161610..161825
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDJ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23407.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_43_140
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(161776..162210)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5U516_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20976.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_43_141
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162384..164654)
DNA (2271bp) protein (757aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFL7_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDM20977.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
alpha-1,2-mannosidase, putative
L1_008_000G1_scaffold_43_142
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(164690..166966)
DNA (2277bp) protein (759aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFL8_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDM20979.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
alpha-1,2-mannosidase, putative
L1_008_000G1_scaffold_43_143
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(167005..167973)
DNA (969bp) protein (323aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFM0_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDM20980.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+-dicitrate sensor, membrane component
L1_008_000G1_scaffold_43_144
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(168049..168603)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFM1_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDM20981.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L1_008_000G1_scaffold_43_145
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(168632..170869)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9Q3D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23413.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-1,2-mannosidase, putative
L1_008_000G1_scaffold_43_146
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(171190..173808)
DNA (2619bp) protein (873aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESS9_9BACE
L1_008_000G1_scaffold_43_147
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173915..174883
DNA (969bp) protein (323aa)
Peptidase, M23 family n=3 Tax=Bacteroides RepID=A5ZFM4_9BACE
Peptidase, M23 family {ECO:0000313|EMBL:EDM20984.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Membrane proteins related to metalloendopeptidases
L1_008_000G1_scaffold_43_148
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

174908..175252
DNA (345bp) protein (115aa)
Transcriptional regulator, MerR family n=3 Tax=Bacteroides RepID=A5ZFM5_9BACE
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDM20985.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator
L1_008_000G1_scaffold_43_149
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(175292..177538)
DNA (2247bp) protein (749aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Bacteroides RepID=A5ZFM6_9BACE
RelA/SpoT family protein {ECO:0000313|EMBL:CCZ73177.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_000G1_scaffold_43_150
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177611..178906)
DNA (1296bp) protein (432aa)
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (EC:3.2.1.-)
Transglycosylase SLT domain protein n=4 Tax=root RepID=A5ZFM7_9BACE
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EDM20987.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Displaying items 121-150 of 169 in total

View Taxonomy