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L1_008_000G1_scaffold_47

Search features with annotation key words

Displaying items 31-60 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_47_31
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22687..24000
DNA (1314bp) protein (438aa)
Transporter n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZH5_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sodium:neurotransmitter symporter family protein
L1_008_000G1_scaffold_47_32
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24151..25005
DNA (855bp) protein (285aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJM5_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEA83757.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
MerR family transcriptional regulator
L1_008_000G1_scaffold_47_33
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25080..25433
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83756.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_47_34
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25475..27106
DNA (1632bp) protein (544aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJM3_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EEA83755.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Na/Pi-cotransporter
L1_008_000G1_scaffold_47_35
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27155..28384)
DNA (1230bp) protein (410aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Clostridium RepID=B6FJM2_9CLOT
L1_008_000G1_scaffold_47_36
unknown

Not on your lists

28621..28743
DNA (123bp) protein (41aa)

This feature has no annotations

L1_008_000G1_scaffold_47_37
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28887..29717
DNA (831bp) protein (277aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=2 Tax=Clostridium RepID=B6FJM1_9CLOT
L1_008_000G1_scaffold_47_38
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29714..30958
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJM0_9CLOT
L1_008_000G1_scaffold_47_39
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31123..32163
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPL9_9CLOT
L1_008_000G1_scaffold_47_40
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32185..32628
DNA (444bp) protein (148aa)
N-acetylglutamate synthase (EC:2.3.1.1)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FJL7_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA83749.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_47_41
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32645..33868
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJL6_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_47_42
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33888..34787
DNA (900bp) protein (300aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=2 Tax=Clostridium RepID=B6FJL5_9CLOT
L1_008_000G1_scaffold_47_43
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34777..35961
DNA (1185bp) protein (395aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase n=2 Tax=Clostridium RepID=B6FJL4_9CLOT
L1_008_000G1_scaffold_47_44
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36034..36468
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83745.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_47_45
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36590..37165
DNA (576bp) protein (192aa)
ComE operon protein 1 n=2 Tax=Clostridium RepID=B6FJL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23898.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
competence protein ComEA helix-hairpin-helix repeat region
L1_008_000G1_scaffold_47_46
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37185..37874
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FJL1_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83743.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000G1_scaffold_47_47
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37819..39297
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PK43_9CLOT
L1_008_000G1_scaffold_47_48
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39324..40253
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23901.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Spore germination protein
L1_008_000G1_scaffold_47_49
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40250..42448
DNA (2199bp) protein (733aa)
DNA internalization competence protein ComEC/Rec2-like protein n=2 Tax=Clostridium RepID=B6FJK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23902.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA internalization-related competence protein ComEC/Rec2
L1_008_000G1_scaffold_47_50
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42507..43487
DNA (981bp) protein (327aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23903.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_47_51
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43565..45379
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Elongation factor 4 n=2 Tax=Clostridium RepID=B6FJK5_9CLOT
GTP-binding protein LepA
L1_008_000G1_scaffold_47_52
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45457..46608
DNA (1152bp) protein (384aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEA83786.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEA83786.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8K6_9FIRM
oxygen-independent coproporphyrinogen III oxidase
L1_008_000G1_scaffold_47_53
unknown

Not on your lists

46580..46696
DNA (117bp) protein (39aa)

This feature has no annotations

L1_008_000G1_scaffold_47_54
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46641..47657
DNA (1017bp) protein (339aa)
Dehydrogenase, FMN-dependent n=2 Tax=Clostridium RepID=B6FJK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24666.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L1_008_000G1_scaffold_47_55
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47648..48994
DNA (1347bp) protein (449aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R6PV92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24669.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L1_008_000G1_scaffold_47_56
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49177..50220
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=3 Tax=Clostridium RepID=R6PM88_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
heat-inducible transcription repressor HrcA
L1_008_000G1_scaffold_47_57
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50238..50879
DNA (642bp) protein (214aa)
Protein GrpE n=2 Tax=Clostridium RepID=B6FJJ8_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
heat shock protein GrpE
L1_008_000G1_scaffold_47_58
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51008..52882
DNA (1875bp) protein (625aa)
Chaperone protein DnaK n=2 Tax=Clostridium RepID=B6FJJ7_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
chaperone protein DnaK
L1_008_000G1_scaffold_47_59
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53001..54194
DNA (1194bp) protein (398aa)
Chaperone protein DnaJ n=2 Tax=Clostridium RepID=B6FJJ6_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
chaperone protein DnaJ
L1_008_000G1_scaffold_47_60
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54223..56319)
DNA (2097bp) protein (699aa)
isoamylase (EC:3.2.1.-)
Putative glycogen debranching enzyme GlgX n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJJ5_9CLOT
Putative glycogen debranching enzyme GlgX {ECO:0000313|EMBL:EEA83791.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying items 31-60 of 201 in total

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