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L1_008_000G1_scaffold_54

Search features with annotation key words

Displaying items 31-60 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_54_31
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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34301..35059
DNA (759bp) protein (253aa)
Transcriptional regulator, GntR family/UbiC transcription regulator-associated domain protein n=4 Tax=Pseudomonas RepID=I2BSB4_PSEFL
transcriptional regulator, GntR family/UbiC transcription regulator-associated domain protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_32
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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35070..36176
DNA (1107bp) protein (369aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Pseudomonas RepID=I2BQP0_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_33
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36157..37179
DNA (1023bp) protein (341aa)
SIS domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BMZ6_PSEFL
SIS domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55629.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_34
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37210..39720
DNA (2511bp) protein (837aa)
NagF protein {ECO:0000313|EMBL:AFJ55081.1}; EC=2.7.3.9 {ECO:0000313|EMBL:AFJ55081.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
nagF; PTS system, N-acetylglucosamine-specific IIA component (EC:2.7.3.9)
PTS system, N-acetylglucosamine-specific IIA component n=2 Tax=Pseudomonas RepID=I2BLE8_PSEFL
L1_008_000G1_scaffold_54_35
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39747..41444
DNA (1698bp) protein (566aa)
nagE; PTS system N-acetylglucosamine-specific transporter subunit IIBC (EC:2.7.1.69)
PTS system, N-acetylglucosamine-specific IIBC component n=3 Tax=Pseudomonas RepID=I2BYW5_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_36
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41570..41839)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KU34_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56816.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_37
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42315..42626)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BQN5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56568.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_38
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42631..46527)
DNA (3897bp) protein (1299aa)
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Pseudomonas RepID=I2BPI4_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_39
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46613..48274
DNA (1662bp) protein (554aa)
Membrane-bound lytic murein transglycosylase F n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6U9_9PSED
mltF; membrane-bound lytic murein transglycosylase F
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_40
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48411..48689)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6HJI3_9PSED
phosphotransferase system, EIIB
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_41
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48692..51226)
DNA (2535bp) protein (845aa)
ptsP; phosphotransferase system, glucose-specific EI/HPr/EIIA component (EC:2.7.3.9)
Putative multiphosphoryl transfer protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KU39_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_42
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51436..52656)
DNA (1221bp) protein (407aa)
Maltoporin n=2 Tax=Pseudomonas RepID=S6J2J2_9PSED
lamB; maltoporin LamB
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_43
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52822..54468)
DNA (1647bp) protein (549aa)
TreC protein {ECO:0000313|EMBL:AFJ55291.1}; EC=3.2.1.93 {ECO:0000313|EMBL:AFJ55291.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Trehalose-6-phosphate hydrolase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HFP9_9PSED
L1_008_000G1_scaffold_54_44
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54591..56033)
DNA (1443bp) protein (481aa)
treP; PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
TreP protein {ECO:0000313|EMBL:AFJ57182.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AFJ57182.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
PTS system, trehalose-specific IIBC component n=3 Tax=Pseudomonas RepID=I2BSE9_PSEFL
L1_008_000G1_scaffold_54_45
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56288..56992
DNA (705bp) protein (235aa)
Trehalose operon transcriptional repressor n=1 Tax=Pseudomonas sp. CF150 RepID=S6KU45_9PSED
treR; trehalose operon repressor
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_46
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57147..58724)
DNA (1578bp) protein (526aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=3 Tax=Pseudomonas RepID=I2BYM9_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_47
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58805..60274)
DNA (1470bp) protein (490aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Pseudomonas RepID=I2BSR2_PSEFL
L1_008_000G1_scaffold_54_48
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60379..60927)
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BVH0_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK72163.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_54_49
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61065..61832)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J9P2_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_50
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61932..62822
DNA (891bp) protein (297aa)
Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CF150 RepID=S6KU50_9PSED
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ56460.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_51
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62833..64212
DNA (1380bp) protein (460aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Pseudomonas RepID=I2BKS3_PSEFL
L1_008_000G1_scaffold_54_52
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64216..65037
DNA (822bp) protein (274aa)
M23 peptidase domain protein n=2 Tax=Pseudomonas RepID=I2BLM0_PSEFL
M23 peptidase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55153.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_53
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65463..67142
DNA (1680bp) protein (560aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
leuA_2; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=3 Tax=Pseudomonas RepID=I2BNS4_PSEFL
L1_008_000G1_scaffold_54_54
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67310..68101)
DNA (792bp) protein (264aa)
hydrolase YafV (EC:3.5.-.-)
Hydrolase YafV n=2 Tax=Pseudomonas RepID=I2BWM1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_55
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68089..69237)
DNA (1149bp) protein (383aa)
ybdL; aminotransferase YbdL (EC:2.6.1.-)
YbdL protein {ECO:0000313|EMBL:AFJ57891.1}; EC=2.6.1.- {ECO:0000313|EMBL:AFJ57891.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Putative aminotransferase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6J2H6_9PSED
L1_008_000G1_scaffold_54_56
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69372..70841)
DNA (1470bp) protein (490aa)
GTPase Der n=4 Tax=Pseudomonas RepID=I2BZI5_PSEFL
engA; ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_57
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70981..72186)
DNA (1206bp) protein (402aa)
Outer membrane protein assembly factor BamB n=3 Tax=Pseudomonas RepID=I2BXF3_PSEFL
yfgL; outer membrane assembly lipoprotein YfgL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_54_58
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72125..72766)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BMT9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55572.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_54_59
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(72808..74097)
DNA (1290bp) protein (430aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Pseudomonas RepID=S6IR88_9PSED
L1_008_000G1_scaffold_54_60
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74121..75230)
DNA (1110bp) protein (370aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=7 Tax=Pseudomonas RepID=E2XXQ7_PSEFL
Displaying items 31-60 of 180 in total

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