name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_008_000G1_scaffold_68_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
301..1185
----------------- DNA (885bp) protein (295aa) |
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQJ7_9FIRM
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CBL09149.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1304..2239)
----------------- DNA (936bp) protein (312aa) |
Elongation factor Ts n=3 Tax=Roseburia RepID=D4KQJ6_9FIRM
translation elongation factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L1_008_000G1_scaffold_68_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2323..3066)
----------------- DNA (744bp) protein (248aa) |
30S ribosomal protein S2 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQJ5_9FIRM
SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3302..3883)
----------------- DNA (582bp) protein (194aa) |
YceG-like family n=3 Tax=Roseburia RepID=D4KW98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00729.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
YceG-like family.
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L1_008_000G1_scaffold_68_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3880..4575)
----------------- DNA (696bp) protein (232aa) |
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GBS7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57705.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4575..4898)
----------------- DNA (324bp) protein (108aa) |
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GBS8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57706.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4923..5687)
----------------- DNA (765bp) protein (255aa) |
RNA polymerase sigma factor n=3 Tax=Roseburia RepID=D4KQJ2_9FIRM
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5708..5983)
----------------- DNA (276bp) protein (92aa) |
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GBT0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57708.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6004..6489)
----------------- DNA (486bp) protein (162aa) |
Chemotaxis protein; stimulates methylation of MCP proteins (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440, ECO:0000313|EMBL:CBL11633.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Probable chemoreceptor glutamine deamidase CheD n=4 Tax=Roseburia RepID=D4KQJ0_9FIRM
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L1_008_000G1_scaffold_68_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6502..7122)
----------------- DNA (621bp) protein (207aa) |
Chemotaxis protein CheC, inhibitor of MCP methylation n=4 Tax=Roseburia RepID=D4KQI9_9FIRM
Chemotaxis protein CheC, inhibitor of MCP methylation
Chemotaxis protein CheC inhibitor of MCP methylation {ECO:0000313|EMBL:CDA57711.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7204..7650)
----------------- DNA (447bp) protein (149aa) |
Chemotaxis signal transduction protein n=4 Tax=Roseburia RepID=D4KQI8_9FIRM
Chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:CDA57712.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7666..9780)
----------------- DNA (2115bp) protein (705aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL11630.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Chemotaxis protein histidine kinase and related kinases (EC:2.7.13.3)
Chemotaxis protein histidine kinase and related kinases n=3 Tax=Roseburia intestinalis RepID=D4KQI7_9FIRM
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L1_008_000G1_scaffold_68_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9782..10846)
----------------- DNA (1065bp) protein (355aa) |
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099, ECO:0000313|EMBL:CBL11629.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Chemotaxis response regulator protein-glutamate methylesterase n=4 Tax=Roseburia RepID=D4KQI6_9FIRM
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L1_008_000G1_scaffold_68_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10843..11604)
----------------- DNA (762bp) protein (254aa) |
Predicted glycosyltransferase n=2 Tax=Roseburia intestinalis RepID=D4KW88_9FIRM
Predicted glycosyltransferase
Predicted glycosyltransferase {ECO:0000313|EMBL:CBL11628.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L1_008_000G1_scaffold_68_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11617..12495)
----------------- DNA (879bp) protein (293aa) |
Site-determining protein n=2 Tax=Roseburia intestinalis RepID=D4KQI4_9FIRM
ATPases involved in chromosome partitioning
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12500..13762)
----------------- DNA (1263bp) protein (421aa) |
Flagellar biosynthetic protein FlhF n=2 Tax=Roseburia RepID=D4KQI3_9FIRM
flagellar biosynthetic protein FlhF
Flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:CDA57718.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13752..15797)
----------------- DNA (2046bp) protein (682aa) |
Flagellar biosynthesis protein FlhA n=3 Tax=Roseburia RepID=D4KQI2_9FIRM
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CDA57719.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
flagellar biosynthesis protein FlhA
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L1_008_000G1_scaffold_68_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15794..16933)
----------------- DNA (1140bp) protein (380aa) |
Flagellar biosynthetic protein FlhB n=2 Tax=Roseburia RepID=C7GBU1_9FIRM
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:CDA57720.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
flagellar biosynthetic protein FlhB
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L1_008_000G1_scaffold_68_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16935..17714)
----------------- DNA (780bp) protein (260aa) |
Flagellar biosynthetic protein fliR n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBU2_9FIRM
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
flagellar biosynthetic protein FliR
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L1_008_000G1_scaffold_68_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17723..17992)
----------------- DNA (270bp) protein (90aa) |
Flagellar biosynthetic protein FliQ n=4 Tax=Roseburia RepID=D4KQI0_9FIRM
flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:CBL09132.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18076..18975)
----------------- DNA (900bp) protein (300aa) |
Flagellar biosynthetic protein FliP n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBU4_9FIRM
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EEV00588.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
flagellar biosynthetic protein FliP
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L1_008_000G1_scaffold_68_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18983..19354)
----------------- DNA (372bp) protein (124aa) |
Flagellar biosynthesis protein, FliO n=3 Tax=Roseburia RepID=D4KW81_9FIRM
Flagellar biosynthesis protein FliO {ECO:0000313|EMBL:CDA57726.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Flagellar biosynthesis protein, FliO.
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L1_008_000G1_scaffold_68_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(19356..19715)
----------------- DNA (360bp) protein (120aa) |
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=4 Tax=Roseburia RepID=D4KQH7_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBL09129.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19754..20932)
----------------- DNA (1179bp) protein (393aa) |
Flagellar motor switch protein FliN n=3 Tax=Roseburia RepID=D4KQH6_9FIRM
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:CDA57728.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20934..21914)
----------------- DNA (981bp) protein (327aa) |
Flagellar motor switch protein FliM n=3 Tax=Roseburia RepID=D4KQH5_9FIRM
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:CDA57729.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L1_008_000G1_scaffold_68_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21946..22473)
----------------- DNA (528bp) protein (176aa) |
Flagellar basal body-associated protein FliL n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQH4_9FIRM
Flagellar basal body-associated protein FliL.
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:CBL09126.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L1_008_000G1_scaffold_68_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22490..23293)
----------------- DNA (804bp) protein (268aa) |
OmpA family protein n=2 Tax=Roseburia RepID=C7GBV0_9FIRM
OmpA family protein {ECO:0000313|EMBL:EEV00594.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
chemotaxis protein MotB
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L1_008_000G1_scaffold_68_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23293..24087)
----------------- DNA (795bp) protein (265aa) |
Transporter, MotA/TolQ/ExbB proton channel family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBV1_9FIRM
Chemotaxis protein PomA {ECO:0000313|EMBL:CDA57733.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Flagellar motor component
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L1_008_000G1_scaffold_68_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24142..24345)
----------------- DNA (204bp) protein (68aa) |
Uncharacterized protein, possibly involved in motility n=4 Tax=Roseburia RepID=D4KQH3_9FIRM
Uncharacterized protein, possibly involved in motility
Uncharacterized protein, possibly involved in motility {ECO:0000313|EMBL:CBL11615.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L1_008_000G1_scaffold_68_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24509..26155)
----------------- DNA (1647bp) protein (549aa) |
Fagellar hook-basal body proteins n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQH2_9FIRM
fagellar hook-basal body proteins
Fagellar hook-basal body proteins {ECO:0000313|EMBL:CBL09124.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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