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L1_008_000G1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_79_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..286
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PKZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24255.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_79_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

463..624
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MY27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04633.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000G1_scaffold_79_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

827..2293
DNA (1467bp) protein (489aa)
Chorismate binding enzyme n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSK4_9CLOT
Chorismate binding enzyme {ECO:0000313|EMBL:EEA81024.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
anthranilate/para-aminobenzoate synthase component I, TrpE
L1_008_000G1_scaffold_79_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2290..2868
DNA (579bp) protein (193aa)
Glutamine amidotransferase, class I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSK3_9CLOT
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EEA81023.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
anthranilate/para-aminobenzoate synthase component II, TrpG
L1_008_000G1_scaffold_79_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2865..3896
DNA (1032bp) protein (344aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=2 Tax=Clostridium RepID=B6FSK2_9CLOT
L1_008_000G1_scaffold_79_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3893..4675
DNA (783bp) protein (261aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=2 Tax=Clostridium RepID=B6FSK1_9CLOT
L1_008_000G1_scaffold_79_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4672..5280
DNA (609bp) protein (203aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q0K9_9CLOT
L1_008_000G1_scaffold_79_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5277..6467
DNA (1191bp) protein (397aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|SAAS:SAAS00123216}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; EC=5.3.1.24 {ECO:0000256|SAAS:SAAS00123176};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Tryptophan synthase, beta subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSK0_9CLOT
tryptophan synthase subunit beta
L1_008_000G1_scaffold_79_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6460..7230
DNA (771bp) protein (257aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSJ9_9CLOT
L1_008_000G1_scaffold_79_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7254..7697)
DNA (444bp) protein (148aa)
Transcriptional regulator, MerR family n=2 Tax=Clostridium RepID=B6FSJ8_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEA81017.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, MerR family
L1_008_000G1_scaffold_79_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7816..9027
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q0M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24301.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L1_008_000G1_scaffold_79_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9115..9537
DNA (423bp) protein (141aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FSJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24308.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_79_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9554..10111
DNA (558bp) protein (186aa)
HD domain protein n=2 Tax=Clostridium RepID=B6FSJ4_9CLOT
HD domain protein {ECO:0000313|EMBL:EEA81014.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_79_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10117..10737
DNA (621bp) protein (207aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uridine kinase n=2 Tax=Clostridium RepID=B6FSJ3_9CLOT
uridine kinase
L1_008_000G1_scaffold_79_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10734..11504
DNA (771bp) protein (257aa)
Cof-like hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSJ2_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEA81012.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000G1_scaffold_79_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11508..12158)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81011.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_79_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12162..13007)
DNA (846bp) protein (282aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FSJ0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81010.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L1_008_000G1_scaffold_79_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13012..13383)
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=B6FSI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24325.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulators
L1_008_000G1_scaffold_79_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13559..13768
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24327.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_79_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13785..14174
DNA (390bp) protein (130aa)
Transcriptional regulator, BlaI/MecI/CopY family n=2 Tax=Clostridium RepID=B6FSI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24329.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
penicillinase repressor
L1_008_000G1_scaffold_79_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14176..14766
DNA (591bp) protein (197aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FSI6_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA81006.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
N-acetyltransferase GCN5
L1_008_000G1_scaffold_79_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14766..15236
DNA (471bp) protein (157aa)
Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Clostridium RepID=B6FSI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24331.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
5-nitroimidazole antibiotic resistance protein
L1_008_000G1_scaffold_79_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15252..16667
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QQV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24332.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L1_008_000G1_scaffold_79_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16771..17472
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FSI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24334.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ABC transporter ATP-binding protein
L1_008_000G1_scaffold_79_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17465..19090
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81001.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_79_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19108..20058
DNA (951bp) protein (317aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSI0_9CLOT
dihydrouridine synthase
L1_008_000G1_scaffold_79_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20098..21063)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PU99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24339.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_79_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21264..23507
DNA (2244bp) protein (748aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSH7_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEA80997.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tetratricopeptide TPR_2 repeat protein
L1_008_000G1_scaffold_79_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23521..25089
DNA (1569bp) protein (523aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PUA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24344.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Group I intron
L1_008_000G1_scaffold_79_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25131..25526)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24348.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying items 1-30 of 154 in total

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