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L1_008_000G1_scaffold_80

Search features with annotation key words

Displaying items 61-90 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_80_61
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56564..57040)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82470.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative NADH-ubiquinone oxidoreductase
L1_008_000G1_scaffold_80_62
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57024..57881)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22700.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
EDD domain protein, DegV family
L1_008_000G1_scaffold_80_63
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57898..58377)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Clostridium RepID=B6FNA0_9CLOT
conserved hypothetical protein TIGR00246
L1_008_000G1_scaffold_80_64
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58393..59229)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PED8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22698.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
metallo-beta-lactamase family protein
L1_008_000G1_scaffold_80_65
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59240..59989)
DNA (750bp) protein (250aa)
Metal cation transporter, ZIP family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN97_9CLOT
Metal cation transporter, ZIP family {ECO:0000313|EMBL:EEA82495.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
zinc/iron permease
L1_008_000G1_scaffold_80_66
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60096..61484)
DNA (1389bp) protein (463aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22696.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_80_67
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61484..62374)
DNA (891bp) protein (297aa)
Ferredoxin--NADP+ reductase, subunit alpha {ECO:0000313|EMBL:EEA82493.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EEA82493.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Ferredoxin--NADP+ reductase, subunit alpha n=2 Tax=Clostridium RepID=B6FN95_9CLOT
L1_008_000G1_scaffold_80_68
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62529..63710)
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EEA82540.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEA82540.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
NADPH-dependent butanol dehydrogenase n=2 Tax=Clostridium RepID=B6FN93_9CLOT
Alcohol dehydrogenase, class IV
L1_008_000G1_scaffold_80_69
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63836..64675)
DNA (840bp) protein (280aa)
Bifunctional protein FolD n=2 Tax=Clostridium RepID=B6FN92_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
methylenetetrahydrofolate dehydrogenase
L1_008_000G1_scaffold_80_70
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64687..66357)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Clostridium RepID=B6FN91_9CLOT
L1_008_000G1_scaffold_80_71
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66376..68850)
DNA (2475bp) protein (825aa)
FtsK/SpoIIIE family protein n=2 Tax=Clostridium RepID=B6FN90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22691.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA translocase FtsK
L1_008_000G1_scaffold_80_72
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68925..69590)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGH5_9CLOT
Putative endopeptidase Clp {ECO:0000313|EMBL:EEA82536.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protease subunit of ATP-dependent Clp proteases
L1_008_000G1_scaffold_80_73
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69709..70992)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN88_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EEA82535.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_80_74
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71021..71752)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein CLONEX_01595 n=2 Tax=Clostridium RepID=B6FN87_9CLOT
Probable transcriptional regulatory protein BN618_00482 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
conserved hypothetical protein TIGR01033
L1_008_000G1_scaffold_80_75
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71792..72640)
DNA (849bp) protein (283aa)
CBS domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN86_9CLOT
CBS domain protein {ECO:0000313|EMBL:EEA82533.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Hemolysins and related proteins containing CBS domains
L1_008_000G1_scaffold_80_76
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72659..73006)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
mRNA interferase n=2 Tax=Clostridium RepID=B6FN85_9CLOT
Growth inhibitor
L1_008_000G1_scaffold_80_77
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73090..74256)
DNA (1167bp) protein (389aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Clostridium RepID=B6FN84_9CLOT
L1_008_000G1_scaffold_80_78
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74274..75758)
DNA (1485bp) protein (495aa)
YjeF domain protein n=2 Tax=Clostridium RepID=B6FN83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22684.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L1_008_000G1_scaffold_80_79
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75863..76558)
DNA (696bp) protein (232aa)
Redox-sensing transcriptional repressor Rex n=2 Tax=Clostridium RepID=B6FN82_9CLOT
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
CoA-binding protein
L1_008_000G1_scaffold_80_80
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76657..78579
DNA (1923bp) protein (641aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN81_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA82528.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000G1_scaffold_80_81
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78647..79843)
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=2 Tax=Clostridium RepID=B6FN80_9CLOT
L1_008_000G1_scaffold_80_82
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79862..80515)
DNA (654bp) protein (218aa)
FCD domain protein n=2 Tax=Clostridium RepID=B6FN79_9CLOT
FCD domain protein {ECO:0000313|EMBL:EEA82526.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, GntR family
L1_008_000G1_scaffold_80_83
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80528..81916)
DNA (1389bp) protein (463aa)
HMGL-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN78_9CLOT
HMGL-like protein {ECO:0000313|EMBL:EEA82525.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
2-isopropylmalate synthase
L1_008_000G1_scaffold_80_84
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82049..82336)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FN77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22678.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_80_85
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82389..82934)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FN76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22677.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein conserved in cyanobacteria
L1_008_000G1_scaffold_80_86
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83153..83539)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82522.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_000G1_scaffold_80_87
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83536..84483)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82521.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_008_000G1_scaffold_80_88
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84487..84891)
DNA (405bp) protein (135aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=B6FN73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22673.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_80_89
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84873..85775)
DNA (903bp) protein (301aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=B6FN73_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEA82520.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type sugar transport system, periplasmic component
L1_008_000G1_scaffold_80_90
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86124..87002)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QL29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22672.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase component
Displaying items 61-90 of 154 in total

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