ggKbase home page

L1_008_000G1_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_84_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..488
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9G4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40514.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_84_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

540..1937
DNA (1398bp) protein (466aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q6V6_BIFDB
Prevent-host-death family protein {ECO:0000313|EMBL:EFM40513.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter permease
L1_008_000G1_scaffold_84_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1934..3043
DNA (1110bp) protein (370aa)
ABC transporter ATP-binding protein (EC:3.6.3.28)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADB10648.1}; EC=3.6.3.28 {ECO:0000313|EMBL:ADB10648.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ATP-binding protein of ABC transporter system n=3 Tax=Bifidobacterium dentium RepID=D2Q6V7_BIFDB
L1_008_000G1_scaffold_84_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3230..4084)
DNA (855bp) protein (285aa)
Phosphohydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q6V8_BIFDB
phosphohydrolase
Phosphohydrolase {ECO:0000313|EMBL:ADB10649.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_84_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4215..5135)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAH9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40510.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glutamine amidotransferase, class-II
L1_008_000G1_scaffold_84_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5231..7408)
DNA (2178bp) protein (726aa)
Probable potassium transport system protein kup n=2 Tax=Bifidobacterium dentium RepID=D2Q6W0_BIFDB
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
kup; Kup system potassium uptake protein
L1_008_000G1_scaffold_84_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7573..8529)
DNA (957bp) protein (319aa)
Hydrolase, TatD family n=2 Tax=Bifidobacterium dentium RepID=E0QAH6_9BIFI
DNase, TatD family
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27959.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_84_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8540..10096)
DNA (1557bp) protein (519aa)
Melibiose carrier protein n=2 Tax=Bifidobacterium dentium RepID=D2Q6W2_BIFDB
MFS/sugar transport protein {ECO:0000313|EMBL:ETO97373.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
melibiose carrier protein
L1_008_000G1_scaffold_84_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10121..12442)
DNA (2322bp) protein (774aa)
Carbohydrate binding domain protein {ECO:0000313|EMBL:EFM40505.1}; EC=3.2.1.55 {ECO:0000313|EMBL:EFM40505.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
alpha-arabinofuranosidase I (EC:3.2.1.55)
Carbohydrate binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAH4_9BIFI
L1_008_000G1_scaffold_84_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12459..13868)
DNA (1410bp) protein (470aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
alpha-galactosidase (EC:3.2.1.49)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAH3_9BIFI
L1_008_000G1_scaffold_84_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14136..15239
DNA (1104bp) protein (368aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0QAH2_9BIFI
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB10656.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_84_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15305..16342
DNA (1038bp) protein (346aa)
Endo-1,4-beta-xylanase n=4 Tax=Bifidobacterium dentium RepID=D2Q6W6_BIFDB
endo-1,4-beta-xylanase
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO97307.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_84_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16603..17586)
DNA (984bp) protein (328aa)
D-ribose-binding protein RbsB n=4 Tax=Bifidobacterium dentium RepID=D2Q6W7_BIFDB
rbsB1; D-ribose-binding protein RbsB
D-ribose-binding protein RbsB {ECO:0000313|EMBL:ADB10658.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_84_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17690..18694)
DNA (1005bp) protein (335aa)
Ribose transport system permease protein RbsC n=4 Tax=Bifidobacterium dentium RepID=D2Q6W8_BIFDB
rbsC1; ribose transporter permease RbsC
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:ADB10659.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_84_15
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18709..20229)
DNA (1521bp) protein (507aa)
rbsA1; ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
Ribose transport ATP-binding protein RbsA n=2 Tax=Bifidobacterium dentium RepID=D2Q6W9_BIFDB
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29996.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L1_008_000G1_scaffold_84_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20310..21524)
DNA (1215bp) protein (405aa)
Anhydro-N-acetylmuramic acid kinase n=4 Tax=Bifidobacterium dentium RepID=D2Q6X0_BIFDB
anhydro-N-acetylmuramic acid kinase
Anhydro-N-acetylmuramic acid kinase {ECO:0000313|EMBL:ADB10661.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_84_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21750..22793)
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAG6_9BIFI
Sugar-binding domain protein {ECO:0000313|EMBL:EFM40497.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_84_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23303..25756)
DNA (2454bp) protein (818aa)
Aga Alpha-galactosidase {ECO:0000313|EMBL:ADB10663.1}; EC=3.2.1.22 {ECO:0000313|EMBL:ADB10663.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
aga; alpha-galactosidase (EC:3.2.1.22)
Aga Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q6X2_BIFDB
L1_008_000G1_scaffold_84_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25987..26742)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S987_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40495.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_84_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26859..29024)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAG3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40494.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_84_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29021..29731)
DNA (711bp) protein (237aa)
Drug resistance transporter, EmrB/QacA subfamily n=4 Tax=Bifidobacterium dentium RepID=D2Q6X5_BIFDB
Drug resistance transporter, EmrB/QacA subfamily
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27973.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_84_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29898..30248)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAG1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40492.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glycosyl hydrolase family 43
L1_008_000G1_scaffold_84_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30286..31392)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAG0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40491.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glycosyl hydrolase family 43
L1_008_000G1_scaffold_84_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31506..32468)
DNA (963bp) protein (321aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QAF9_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40490.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glycosyl hydrolase family 43
L1_008_000G1_scaffold_84_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32499..33467)
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QAF8_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40489.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
raffinose transporter permease
L1_008_000G1_scaffold_84_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33546..35210)
DNA (1665bp) protein (555aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAF7_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM40488.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
extracellular solute-binding protein
L1_008_000G1_scaffold_84_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35332..36486
DNA (1155bp) protein (385aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0QAF5_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFM40486.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
cebR; CebR Cellobiose transporter transcriptional regulator
L1_008_000G1_scaffold_84_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36676..38649
DNA (1974bp) protein (658aa)
LacZ1 Beta-galactosidase {ECO:0000313|EMBL:ADB10673.1}; EC=3.2.1.23 {ECO:0000313|EMBL:ADB10673.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
lacZ1; beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, TIM barrel domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S976_9BIFI
L1_008_000G1_scaffold_84_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39067..40854)
DNA (1788bp) protein (596aa)
ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
ATP-binding and permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q7B2_BIFDB
ABC transporter transmembrane region {ECO:0000313|EMBL:ETO97301.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_84_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40870..42750)
DNA (1881bp) protein (627aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM40482.1}; EC=3.6.3.44 {ECO:0000313|EMBL:EFM40482.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAF1_9BIFI
Displaying items 1-30 of 128 in total

View Taxonomy