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L1_008_000G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_88_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(433..831)
DNA (399bp) protein (133aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides caccae RepID=A5ZLW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16561.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
FOG: CheY-like receiver
L1_008_000G1_scaffold_88_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

951..2588
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZLW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16560.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000G1_scaffold_88_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2985..3395
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16559.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_88_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3501..4775
DNA (1275bp) protein (425aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJX3_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY16558.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
cation efflux system protein
L1_008_000G1_scaffold_88_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4889..7975
DNA (3087bp) protein (1029aa)
CzcA family heavy metal efflux pump n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U8G7_9BACE
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:CCZ74335.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AcrB/AcrD/AcrF family cation efflux system protein
L1_008_000G1_scaffold_88_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8019..9212
DNA (1194bp) protein (398aa)
Outer membrane efflux protein n=2 Tax=Bacteroides RepID=A5ZJV2_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:CCZ74336.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_000G1_scaffold_88_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9227..10681)
DNA (1455bp) protein (485aa)
NOL1/NOP2/sun family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJV1_9BACE
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EDM19931.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA and rRNA cytosine-C5-methylase
L1_008_000G1_scaffold_88_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10790..11617
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZJV0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19930.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_88_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11614..12165
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=2 Tax=root RepID=A5ZJU9_9BACE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase, sigma-24 subunit, RpoE
L1_008_000G1_scaffold_88_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12146..12475
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZJU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19928.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_88_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12903..14165
DNA (1263bp) protein (421aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PJD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16551.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_88_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14301..15095
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=3 Tax=Bacteroides RepID=A5ZJU6_9BACE
L1_008_000G1_scaffold_88_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15142..15636
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Dihydrofolate reductase n=2 Tax=Bacteroides caccae RepID=A5ZJU5_9BACE
dihydrofolate reductase
L1_008_000G1_scaffold_88_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15657..16136)
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=2 Tax=Bacteroides caccae RepID=A5ZJU4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16548.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transcriptional regulator
L1_008_000G1_scaffold_88_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16289..17566
DNA (1278bp) protein (426aa)
IgA Peptidase M64 n=3 Tax=Bacteroides RepID=A5ZJU3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16547.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_88_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17605..18141
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16546.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_88_17
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18583..19053)
DNA (471bp) protein (157aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A5ZJU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ89023.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
Biopolymer transport protein
L1_008_000G1_scaffold_88_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19060..19650)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJT9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16544.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Biopolymer transport protein ExbD/TolR.
L1_008_000G1_scaffold_88_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19686..20171)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19918.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_000G1_scaffold_88_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20178..20978)
DNA (801bp) protein (267aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=2 Tax=Bacteroides caccae RepID=A5ZJT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16542.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Biopolymer transport proteins
L1_008_000G1_scaffold_88_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21049..21201)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJT5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19915.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_88_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21262..22038)
DNA (777bp) protein (259aa)
TatD family hydrolase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJC5_9BACE
TatD family hydrolase {ECO:0000313|EMBL:EIY16541.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_88_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22032..22748)
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16540.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000G1_scaffold_88_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22766..23740)
DNA (975bp) protein (325aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=3 Tax=Bacteroides RepID=A5ZJT2_9BACE
Polyprenyl synthetase {ECO:0000313|EMBL:EDM19912.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_000G1_scaffold_88_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23812..24495)
DNA (684bp) protein (228aa)
TonB-dependent receptor n=3 Tax=Bacteroides RepID=A5ZJT1_9BACE
TonB family domain-containing protein {ECO:0000313|EMBL:CCZ72917.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
outer membrane transport energization protein TonB (TC 2.C.1.1.1)
L1_008_000G1_scaffold_88_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24540..25400
DNA (861bp) protein (287aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=2 Tax=Bacteroides RepID=I8UU59_9BACE
L1_008_000G1_scaffold_88_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25442..26308
DNA (867bp) protein (289aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=3 Tax=Bacteroides RepID=A5ZJS9_9BACE
L1_008_000G1_scaffold_88_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26445..26549
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UQP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16535.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_000G1_scaffold_88_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26519..27499
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=3 Tax=Bacteroides RepID=A5ZJS8_9BACE
L1_008_000G1_scaffold_88_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27624..28856)
DNA (1233bp) protein (411aa)
PepSY domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJS7_9BACE
PepSY domain protein {ECO:0000313|EMBL:EDM19907.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Uncharacterized iron-regulated membrane protein
Displaying items 1-30 of 121 in total

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